RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 IGKV1-39P01597 117 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 IGKV1D-39P04432 117 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 CD3EP07766 207 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 TNFRSF1AP19438 455 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 RPL12P30050 165 aaKnown RBP13.87□□□□□ -0.19
USHBP1-203ENST00000431146 PAX5Q02548 391 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 NMSQ5H8A3 153 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 OR2B11Q5JQS5 317 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 BTNL3Q6UXE8 466 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 COMMD7Q86VX2 200 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 ZNF645Q8N7E2 425 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 ABHD14BQ96IU4 210 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 AKR1E2Q96JD6 320 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 GAFA1Q96PS6 74 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 C12orf57Q99622 126 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 MAGT1Q9H0U3 335 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 RCL1Q9Y2P8 373 aaKnown RBP13.87□□□□□ -0.19
USHBP1-203ENST00000431146 I3L521 148 aa13.86□□□□□ -0.19
USHBP1-203ENST00000431146 CXorf66Q5JRM2 361 aaPredicted RBP13.86□□□□□ -0.19
USHBP1-203ENST00000431146 ERGIC1Q969X5 290 aa13.86□□□□□ -0.19
USHBP1-203ENST00000431146 SMIM3Q9BZL3 60 aa13.86□□□□□ -0.19
USHBP1-203ENST00000431146 HRNRQ86YZ3 2850 aaPredicted RBP13.86□□□□□ -0.19
USHBP1-203ENST00000431146 ST8SIA3O43173 380 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 VDAC1P21796 283 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 LINC00205P59089 165 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 FBXL19-AS1Q494R0 122 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 ZNF561Q8N587 486 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 CCL17Q92583 94 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 BSCL2Q96G97 398 aaPredicted RBP13.85□□□□□ -0.19
USHBP1-203ENST00000431146 DYNLRB1Q9NP97 96 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 PSG11Q9UQ72 335 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 CD55P08174 381 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 ADH4P08319 380 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 RPL30P62888 115 aaKnown RBP13.85□□□□□ -0.19
USHBP1-203ENST00000431146 ZNF273Q14593 569 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 ZNF585BQ52M93 769 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 UTF1Q5T230 341 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 DMBX1Q8NFW5 382 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 SDSLQ96GA7 329 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 DIRC2Q96SL1 478 aa13.85□□□□□ -0.19
USHBP1-203ENST00000431146 SEBOXQ9HB31 216 aaPredicted RBP13.85□□□□□ -0.19
USHBP1-203ENST00000431146 VSTM5A8MXK1 200 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 E5RGE8 158 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 GZMHP20718 246 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 NKX2-1P43699 371 aaPredicted RBP13.84□□□□□ -0.19
USHBP1-203ENST00000431146 LIN7CQ9NUP9 197 aaKnown RBP13.84□□□□□ -0.19
USHBP1-203ENST00000431146 GNG12Q9UBI6 72 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 NSG2Q9Y328 171 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 POMT1Q9Y6A1 747 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 TMPRSS2O15393 492 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 RAMP3O60896 148 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 MST1LQ2TV78 715 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 RPL7L1Q6DKI1 246 aaKnown RBP13.84□□□□□ -0.19
USHBP1-203ENST00000431146 TRAT1Q6PIZ9 186 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 ZNF788Q6ZQV5 615 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 RNASE11Q8TAA1 199 aaKnown RBP13.84□□□□□ -0.19
USHBP1-203ENST00000431146 IL22RA2Q969J5 263 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 GPR146Q96CH1 333 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 SPIN2AQ99865 258 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 SPIN2BQ9BPZ2 258 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 EGLN1Q9GZT9 426 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 ZNF665Q9H7R5 613 aa13.84□□□□□ -0.19
USHBP1-203ENST00000431146 CISD1Q9NZ45 108 aaKnown RBP13.84□□□□□ -0.19
USHBP1-203ENST00000431146 DUXBA0A1W2PPF3 345 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 TUBAL3A6NHL2 446 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 LRRC30A6NM36 301 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 SSSCA1O60232 199 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 APOBEC3AP31941 199 aaPredicted RBP13.83□□□□□ -0.2
USHBP1-203ENST00000431146 TMEM33P57088 247 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 HTD2P86397 168 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 TEX36Q5VZQ5 186 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 Q6ZRM9 215 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 STX12Q86Y82 276 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 LEAP2Q969E1 77 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 C14orf79Q96F83 325 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 TOLLIPQ9H0E2 274 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 PLEKHF2Q9H8W4 249 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 KCNJ16Q9NPI9 418 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 CALYQ9NYX4 217 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 FBXL17Q9UF56 701 aa13.83□□□□□ -0.2
USHBP1-203ENST00000431146 IGKV1-5P01602 117 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 RRASP10301 218 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 TPT1P13693 172 aaKnown RBP13.82□□□□□ -0.2
USHBP1-203ENST00000431146 MUC1P15941 1255 aaPredicted RBP13.82□□□□□ -0.2
USHBP1-203ENST00000431146 AKR1C2P52895 323 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 BAP18Q8IXM2 172 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 STOML3Q8TAV4 291 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 AGMATQ9BSE5 352 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 SDHAF2Q9NX18 166 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 RNF115Q9Y4L5 304 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 ACACBO00763 2458 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 LOXL3P58215 753 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 ZNF816Q0VGE8 651 aaPredicted RBP13.82□□□□□ -0.2
USHBP1-203ENST00000431146 MORN2Q502X0 79 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 TCF23Q7RTU1 214 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 TMED6Q8WW62 240 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 OR6C3Q9NZP0 311 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 HCFC1P51610 2035 aa13.82□□□□□ -0.2
USHBP1-203ENST00000431146 CLEC18AA5D8T8 446 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 TMEM178BH3BS89 294 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms