RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RNF115Q9Y4L5 304 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 B9A039 149 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 G3V3Q6 166 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 M0QZ24 198 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 LMX1BO60663 402 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 SMPD2O60906 423 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 NSUN5P2Q63ZY6 315 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 SLC35E3Q7Z769 313 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 JPT1Q9UK76 154 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 COL6A6A6NMZ7 2263 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 GFRA3O60609 400 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 SPCS3P61009 180 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 SDHCQ99643 169 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-208ENST00000430669 A0A0G2JMM0 328 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 A0A1W2PPB8 328 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 A0A1W2PRS3 328 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 ODAMA1E959 279 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 KIR3DP1A8MWS1 328 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 ATP6V1G2-DDX39BF2Z307 99 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 GALR1P47211 349 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 Q56UQ5 140 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 WDYHV1Q96HA8 205 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 LYRM2Q9NU23 88 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-208ENST00000430669 NAT8Q9UHE5 227 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 ADRA2AP08913 450 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 GAS1P54826 345 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 DYRK2Q92630 601 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 UBTD1Q9HAC8 227 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF705GA8MUZ8 300 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-208ENST00000430669 OR2A4O95047 310 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 ASCL1P50553 236 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 ACSM6Q6P461 480 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 FAM57AQ8TBR7 257 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 GTF3AQ92664 365 aaKnown RBP9.9□□□□□ -0.82
PTCH1-208ENST00000430669 OR2A7Q96R45 310 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 IQCF6A8MYZ5 107 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 SULT1A2P50226 295 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 C19orf57Q0VDD7 668 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 ZDHHC16Q969W1 377 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 CTDSP1Q9GZU7 261 aa9.9□□□□□ -0.82
PTCH1-208ENST00000430669 CLDN14O95500 239 aa9.9□□□□□ -0.83
PTCH1-208ENST00000430669 MPZP25189 248 aa9.9□□□□□ -0.83
PTCH1-208ENST00000430669 PRSS12P56730 875 aa9.9□□□□□ -0.83
PTCH1-208ENST00000430669 BCL2L2Q92843 193 aaPredicted RBP9.9□□□□□ -0.83
PTCH1-208ENST00000430669 TXNDC17Q9BRA2 123 aa9.9□□□□□ -0.83
PTCH1-208ENST00000430669 IGHV3OR15-7A0A075B7D8 119 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 CLEC3BP05452 202 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 SCTP09683 121 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 CD59P13987 128 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 OR52L2PQ8NGH6 319 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 NDUFA6P56556 154 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 RASL11BQ9BPW5 248 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 GYPAP02724 150 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 G6PCP35575 357 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 UNC119Q13432 240 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 ACSF3Q4G176 576 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF362Q5T0B9 420 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-208ENST00000430669 ADAM5Q6NVV9 412 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 WDR73Q6P4I2 378 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 PDPNQ86YL7 162 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 RND3P61587 244 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 PERPQ96FX8 193 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 GRAMD2BQ96HH9 432 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 CLN5O75503 358 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 RBP4P02753 201 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 CTRB1P17538 263 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 CTRB2Q6GPI1 263 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 SOSTQ9BQB4 213 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 CTXND1A0A1B0GTU2 59 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-208ENST00000430669 OR5B3Q8NH48 314 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 USF1P22415 310 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-208ENST00000430669 COX19Q49B96 90 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
PTCH1-208ENST00000430669 TMEM88Q6PEY1 159 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 DHRS11Q6UWP2 260 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 MUC1P15941 1255 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-208ENST00000430669 TGIF1Q15583 401 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 UBALD1Q8TB05 177 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 TMEM18Q96B42 140 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 TMEM218A2RU14 115 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF729A6NN14 1252 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-208ENST00000430669 J3QR06 171 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 ADAM11O75078 769 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 SLC25A22Q9H936 323 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 AKAP6Q13023 2319 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 EML5Q05BV3 1969 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF154Q13106 437 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 IDI2-AS1Q9NZ38 188 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 KCNMB2Q9Y691 235 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 GOSR1O95249 250 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 ARG1P05089 322 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 PGA5P0DJD9 388 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 PPP1CCP36873 323 aaKnown RBP9.88□□□□□ -0.83
PTCH1-208ENST00000430669 RNF212Q495C1 297 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 SIGLECL1Q8N7X8 197 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 NARFLQ9H6Q4 476 aa9.88□□□□□ -0.83
PTCH1-208ENST00000430669 CLDN34H7C241 214 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 PGLYRP1O75594 196 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms