RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 BAMBIQ13145 260 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 IL15RAQ13261 267 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 PMVKQ15126 192 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 ATP6AP1LQ52LC2 224 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 RBM48Q5RL73 367 aaKnown RBP1.28□□□□□ -2.2
PTPRC-208ENST00000427110 C6orf52Q5T4I8 152 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 GLYATQ6IB77 296 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 ERICH5Q6P6B1 374 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TBPL2Q6SJ96 375 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 FAM131AQ6UXB0 335 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 C16orf47Q6ZP98 133 aaPredicted RBP1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TPGS1Q6ZTW0 290 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 MSRB3Q8IXL7 192 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 CPNE9Q8IYJ1 553 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TCAIMQ8N3R3 496 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TRIML2Q8N7C3 387 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 LINC00304Q8N9R0 145 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 C1orf64Q8NEQ6 169 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 OR8J2Q8NGG1 315 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 OR4A15Q8NGL6 344 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 OR52N1Q8NH53 320 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 OR5K1Q8NHB7 308 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 NDNFQ8TB73 568 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 WFDC5Q8TCV5 224 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 EEF1AKMT1Q8WVE0 214 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 LZICQ8WZA0 190 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 GTF2H4Q92759 462 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 FAM131CQ96AQ9 280 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TESCQ96BS2 214 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 PPP1R14BQ96C90 147 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 RMND5BQ96G75 393 aaPredicted RBP1.28□□□□□ -2.2
PTPRC-208ENST00000427110 RNF170Q96K19 258 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TEX37Q96LM6 180 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 PPP1R36Q96LQ0 422 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 PPP3R2Q96LZ3 170 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 CNBD2Q96M20 576 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TSNAXQ99598 290 aaKnown RBP1.28□□□□□ -2.2
PTPRC-208ENST00000427110 CGREF1Q99674 301 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 CIB1Q99828 191 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 UGT2B28Q9BY64 529 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 MRPL20Q9BYC9 149 aaKnown RBP1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TRIM4Q9C037 500 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 GABARAPL1Q9H0R8 117 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 KIR3DX1Q9H7L2 352 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 PLEKHF2Q9H8W4 249 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 C1orf109Q9NX04 203 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 USE1Q9NZ43 259 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 OPTCQ9UBM4 332 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 RSL24D1Q9UHA3 163 aaKnown RBP1.28□□□□□ -2.2
PTPRC-208ENST00000427110 VAX2Q9UIW0 290 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 HS3ST2Q9Y278 367 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 FIS1Q9Y3D6 152 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TIMM22Q9Y584 194 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 FADS3Q9Y5Q0 445 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 HSPE1-MOB4S4R3N1 261 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 COL4A2P08572 1712 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TMEM131Q92545 1883 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 TICRRQ7Z2Z1 1910 aa1.28□□□□□ -2.2
PTPRC-208ENST00000427110 GOLGA4Q13439 2230 aaKnown RBP1.28□□□□□ -2.2
PTPRC-208ENST00000427110 PDE4DIPQ5VU43 2346 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 MYO7AQ13402 2215 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PRRC2BQ5JSZ5 2229 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ATG2BQ96BY7 2078 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 EML5Q05BV3 1969 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CEP192Q8TEP8 1941 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 IGKV3D-11A0A0A0MRZ8 115 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 IGHV2OR16-5A0A0B4J2B6 119 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 C1orf232A0A0U1RR37 186 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 FAM240AA0A1B0GVK7 77 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 SLC5A10A0PJK1 596 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 IQCF5A8MTL0 148 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 EVPLLA8MZ36 301 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 C16orf90A8MZG2 172 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 G3V2T6 193 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 H3BSA7 217 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PSMD11O00231 422 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CXCR6O00574 342 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 NDUFS5O43920 106 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 UGT2B11O75310 529 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PSIP1O75475 530 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CBR3O75828 277 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 SNAP29O95721 258 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 NRASP01111 189 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 HRASP01112 189 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 KRASP01116 189 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PDYNP01213 254 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PFN1P07737 140 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 HTR1AP08908 422 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PIRTP0C851 137 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PRPS1L1P21108 318 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PPIBP23284 216 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CRHBPP24387 322 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 GNRHRP30968 328 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CCR7P32248 378 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 S100A3P33764 101 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 KDELR2P33947 212 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CA5AP35218 305 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ARR3P36575 388 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 SPINT3P49223 89 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 RGS6P49758 472 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms