RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 RBMXL3Q8N7X1 1067 aaKnown RBP12.94□□□□□ -0.34
SHISA9-201ENST00000423335 ZNF524Q96C55 264 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 BTF3L4Q96K17 158 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 CLDN16Q9Y5I7 305 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 LOC102723996A0A087X1L8 192 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 C5orf63A6NC05 138 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 FOXG1P55316 489 aaPredicted RBP12.94□□□□□ -0.34
SHISA9-201ENST00000423335 TMPRSS3P57727 454 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 ERVFC1-1P60608 527 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 BTNL8Q6UX41 500 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 LILRB1Q8NHL6 650 aaPredicted RBP12.94□□□□□ -0.34
SHISA9-201ENST00000423335 DAZAP1Q96EP5 407 aaKnown RBP12.94□□□□□ -0.34
SHISA9-201ENST00000423335 RAB4AP20338 218 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 FAM27E3Q08E93 113 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 TMEM187Q14656 261 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 OR10A7Q8NGE5 316 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 SSMEM1Q8WWF3 244 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 BORCS7Q96B45 105 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 DMRTA2Q96SC8 542 aa12.94□□□□□ -0.34
SHISA9-201ENST00000423335 CARHSP1Q9Y2V2 147 aaKnown RBP12.94□□□□□ -0.34
SHISA9-201ENST00000423335 CYC1P08574 325 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 PMELP40967 661 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 CDC34P49427 236 aaPredicted RBP12.93□□□□□ -0.34
SHISA9-201ENST00000423335 HIST1H3AP68431 136 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 TIGITQ495A1 244 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 OR5H1A6NKK0 313 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 OR5G3P0C626 314 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 PGA5P0DJD9 388 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 MDH2P40926 338 aaKnown RBP12.93□□□□□ -0.34
SHISA9-201ENST00000423335 TNFAIP6P98066 277 aaPredicted RBP12.93□□□□□ -0.34
SHISA9-201ENST00000423335 MOGAT3Q86VF5 341 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 OR2T10Q8NGZ9 312 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 MOB3AQ96BX8 217 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 BSCL2Q96G97 398 aaPredicted RBP12.93□□□□□ -0.34
SHISA9-201ENST00000423335 WFIKKN1Q96NZ8 548 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 CTDSP1Q9GZU7 261 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 ACSM6Q6P461 480 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 CALHM1Q8IU99 346 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 PRO3102Q9H379 93 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 VAX2Q9UIW0 290 aa12.93□□□□□ -0.34
SHISA9-201ENST00000423335 TGOLN2O43493 480 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 IGHMP01871 453 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 SNRPCP09234 159 aaKnown RBP12.92□□□□□ -0.34
SHISA9-201ENST00000423335 LGALS4P56470 323 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 ZNF818PQ6ZRF7 136 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 MRPL30Q8TCC3 161 aaKnown RBP12.92□□□□□ -0.34
SHISA9-201ENST00000423335 MS4A10Q96PG2 267 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 Q9N2K0 584 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 NKX6-3A6NJ46 265 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 PMCHP20382 165 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 SPACA3Q8IXA5 215 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 IGHV3OR15-7A0A075B7D8 119 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 TRAV34A0A0B4J273 112 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 PPIHO43447 177 aaKnown RBP12.92□□□□□ -0.34
SHISA9-201ENST00000423335 DNPH1O43598 174 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 AESQ08117 197 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 ACY3Q96HD9 319 aa12.92□□□□□ -0.34
SHISA9-201ENST00000423335 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 GNG10P50151 68 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 PNRC1Q12796 327 aaPredicted RBP12.91□□□□□ -0.34
SHISA9-201ENST00000423335 SMIM21Q3B7S5 101 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 PHYHD1Q5SRE7 291 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 NEIL1Q96FI4 390 aaPredicted RBP12.91□□□□□ -0.34
SHISA9-201ENST00000423335 LPAR2Q9HBW0 351 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 ZNF331Q9NQX6 463 aaPredicted RBP12.91□□□□□ -0.34
SHISA9-201ENST00000423335 RFNGQ9Y644 331 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 USP9YO00507 2555 aaPredicted RBP12.91□□□□□ -0.34
SHISA9-201ENST00000423335 OR5B21A6NL26 309 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 KIAA1324LA8MWY0 1029 aaPredicted RBP12.91□□□□□ -0.34
SHISA9-201ENST00000423335 TCL1AP56279 114 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 SIGLECL1Q8N7X8 197 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 DTD1Q8TEA8 209 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 EDARADDQ8WWZ3 215 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 RAB9BQ9NP90 201 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 IGSF23A1L1A6 192 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 PITX3O75364 302 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 SUPT4H1P63272 117 aaKnown RBP12.91□□□□□ -0.34
SHISA9-201ENST00000423335 FOXO1Q12778 655 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 KHDC3LQ587J8 217 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 ZNF441Q8N8Z8 693 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 NAT8Q9UHE5 227 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 TMPRSS2O15393 492 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 BCL2P10415 239 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 GPR146Q96CH1 333 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 TIMD4Q96H15 378 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 SMIM8Q96KF7 97 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 MRPL13Q9BYD1 178 aaKnown RBP12.91□□□□□ -0.34
SHISA9-201ENST00000423335 CLCF1Q9UBD9 225 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 IL36RNQ9UBH0 155 aa12.91□□□□□ -0.34
SHISA9-201ENST00000423335 CD3EP07766 207 aa12.9□□□□□ -0.34
SHISA9-201ENST00000423335 HLA-GP17693 338 aa12.9□□□□□ -0.34
SHISA9-201ENST00000423335 EGR1P18146 543 aa12.9□□□□□ -0.34
SHISA9-201ENST00000423335 CEBPDP49716 269 aaPredicted RBP12.9□□□□□ -0.34
SHISA9-201ENST00000423335 UCNP55089 124 aa12.9□□□□□ -0.34
SHISA9-201ENST00000423335 C1orf185Q5T7R7 199 aa12.9□□□□□ -0.34
SHISA9-201ENST00000423335 C5orf24Q7Z6I8 188 aa12.9□□□□□ -0.34
SHISA9-201ENST00000423335 LYG1Q8N1E2 194 aa12.9□□□□□ -0.34
SHISA9-201ENST00000423335 HSBP1L1C9JCN9 74 aa12.9□□□□□ -0.34
SHISA9-201ENST00000423335 FAM3BP58499 235 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms