RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TMEM25Q86YD3 366 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 LAX1Q8IWV1 398 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 H1FOOQ8IZA3 346 aaPredicted RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 THAP8Q8NA92 274 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 APOBEC3GQ9HC16 384 aaKnown RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 EFCAB6Q5THR3 1501 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 BCL2P10415 239 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 LCN2P80188 198 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 LY6KQ17RY6 165 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 SIGLEC15Q6ZMC9 328 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 PAQR9Q6ZVX9 377 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 RTL10Q7L3V2 364 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 SLC25A28Q96A46 364 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 OR2H1Q9GZK4 316 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 ST20Q9HBF5 79 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 PLAC1Q9HBJ0 212 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 FAM53CQ9NYF3 392 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 SLC25A10Q9UBX3 287 aaPredicted RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 CRB1P82279 1406 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 IGHG4P01861 327 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 PRB4P10163 310 aaPredicted RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 CYBAP13498 195 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 RPL8P62917 257 aaKnown RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 HAMPP81172 84 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM177Q53S58 311 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 KLF17Q5JT82 389 aaPredicted RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 LINC00346Q8IVM7 164 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 IGSF21Q96ID5 467 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 DCTN5Q9BTE1 182 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 SLIRPQ9GZT3 109 aaKnown RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 GTSF1LQ9H1H1 148 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CLEC2DQ9UHP7 191 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 FOXA2Q9Y261 457 aaPredicted RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 INSIG2Q9Y5U4 225 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CLDN5O00501 218 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 PRSS23O95084 383 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CD52P31358 61 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 KRTCAP3Q53RY4 240 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 FAM209AQ5JX71 171 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 GFRALQ6UXV0 394 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CLEC17AQ6ZS10 378 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 KDM5AP29375 1690 aaKnown RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 NLRP1Q9C000 1473 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 ISL1P61371 349 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 SELENBP1Q13228 472 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 NEGR1Q7Z3B1 354 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 GTSCR1Q86UQ5 136 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 BOD1L2Q8IYS8 172 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 TSKUQ8WUA8 353 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 TNFRSF19Q9NS68 423 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 MTCH2Q9Y6C9 303 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 R4GMQ9 66 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CLTCL1P53675 1640 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 DNAJC25-GNG10A0A024R161 153 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 SCRG1O75711 98 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 TNFSF15O95150 251 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CLDN10P78369 228 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CFHR1Q03591 330 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 SYT14P1Q58G82 188 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 ABHD12Q8N2K0 398 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF664Q8N3J9 261 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CYB5D2Q8WUJ1 264 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 MRPL32Q9BYC8 188 aaKnown RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF319Q9P2F9 582 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 TCHHQ07283 1943 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 TRGV11A0A075B6L2 103 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 H3BQ15 152 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 FCMRO60667 390 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 NDUFA3O95167 84 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 EML2O95834 649 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 FGF8P55075 233 aaPredicted RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 RPS26P62854 115 aaKnown RBP4□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF518AQ6AHZ1 1483 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 COL17A1Q9UMD9 1497 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 NRG2O14511 850 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 FOXH1O75593 365 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 NDUFB6O95139 128 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 IL1RNP18510 177 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CA7P43166 264 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 OTPQ5XKR4 325 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 FBXO17Q96EF6 278 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 RNF125Q96EQ8 232 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 SETD1AO15047 1707 aaKnown RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 A0A087WX48 190 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 MYMXA0A1B0GTQ4 84 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 NPIPB4C9JG80 1138 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 B4GALT3O60512 393 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CD28P10747 220 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CTLA4P16410 223 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 IGFBP2P18065 325 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 MMP16P51512 607 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 SS18Q15532 418 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 IRF2BP2Q7Z5L9 587 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 PPP1R32Q7Z5V6 425 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 DEFB119Q8N690 84 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 RFESDQ8TAC1 157 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 RTN4RQ9BZR6 473 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 VSIRQ9H7M9 311 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 MYO3AQ8NEV4 1616 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 IGLON5A6NGN9 336 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms