RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 C1QTNF9BB2RNN3 333 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 TSPAN2O60636 221 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 ADRA2AP08913 450 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 SLC25A53Q5H9E4 307 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 MBNL2Q5VZF2 373 aaKnown RBP10.11□□□□□ -0.79
HLCS-202ENST00000399120 TXNDC17Q9BRA2 123 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 ZNF430Q9H8G1 570 aaPredicted RBP10.11□□□□□ -0.79
HLCS-202ENST00000399120 SERGEFQ9UGK8 458 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 ZDHHC8Q9ULC8 765 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 A0A1W2PQM1 296 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 SOD3P08294 240 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 ZNF345Q14585 488 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 HOGA1Q86XE5 327 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 SHISA5Q8N114 240 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 SRSF12Q8WXF0 261 aaKnown RBP10.11□□□□□ -0.79
HLCS-202ENST00000399120 CCL13Q99616 98 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 RBM11P57052 281 aaKnown RBP10.11□□□□□ -0.79
HLCS-202ENST00000399120 C1orf174Q8IYL3 243 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 LHFPL5Q8TAF8 219 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 TRAV30A0A087WSZ9 112 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 TRGC2P03986 189 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 HKR1P10072 659 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 CTGFP29279 349 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 LEMD1Q68G75 181 aa10.11□□□□□ -0.79
HLCS-202ENST00000399120 MBD1Q9UIS9 605 aaPredicted RBP10.11□□□□□ -0.79
HLCS-202ENST00000399120 RECKO95980 971 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 RELQ04864 619 aaPredicted RBP10.1□□□□□ -0.79
HLCS-202ENST00000399120 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
HLCS-202ENST00000399120 HIST1H1AQ02539 215 aaPredicted RBP10.1□□□□□ -0.79
HLCS-202ENST00000399120 ATP5G2Q06055 141 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 C1orf185Q5T7R7 199 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 FAM206AQ9NX38 181 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 LINC00862A6NCI5 91 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 ZNF250P15622 560 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 IGFBP6P24592 240 aaPredicted RBP10.1□□□□□ -0.79
HLCS-202ENST00000399120 RUNX1Q01196 453 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 MMD2Q8IY49 270 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 A0A1B0GV72 72 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 PF4P02776 101 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 CCL8P80075 99 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 GAB4Q2WGN9 574 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 C1QL3Q5VWW1 255 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 ZNF645Q8N7E2 425 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 MRPL16Q9NX20 251 aaKnown RBP10.1□□□□□ -0.79
HLCS-202ENST00000399120 KCNE5Q9UJ90 142 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 KNDC1Q76NI1 1749 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 MGST3O14880 152 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 RPL8P62917 257 aaKnown RBP10.1□□□□□ -0.79
HLCS-202ENST00000399120 WDR34Q96EX3 536 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 DMRTA2Q96SC8 542 aa10.1□□□□□ -0.79
HLCS-202ENST00000399120 CXCL10P02778 98 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 UCN2Q96RP3 112 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 PLA2G2FQ9BZM2 168 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 V9GYH0 126 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 CELA2BP08218 269 aaPredicted RBP10.09□□□□□ -0.79
HLCS-202ENST00000399120 CCL3P10147 92 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 NRIP2Q9BQI9 281 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 IGLV3-16A0A075B6K0 115 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 ZFP36L2P47974 494 aaKnown RBP10.09□□□□□ -0.79
HLCS-202ENST00000399120 SNRPD3P62318 126 aaKnown RBP10.09□□□□□ -0.79
HLCS-202ENST00000399120 TMEM170BQ5T4T1 132 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 ZNF488Q96MN9 340 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 RBKSQ9H477 322 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 F12P00748 615 aaPredicted RBP10.09□□□□□ -0.79
HLCS-202ENST00000399120 KIAA0040Q15053 153 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 MSRB3Q8IXL7 192 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 ZCCHC14Q8WYQ9 949 aaKnown RBP10.09□□□□□ -0.79
HLCS-202ENST00000399120 TMEM30AQ9NV96 361 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 TUBD1Q9UJT1 453 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 H0Y980 276 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 THY1P04216 161 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 FXYD3Q14802 87 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 C9orf50Q5SZB4 431 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 ZNF324BQ6AW86 544 aaPredicted RBP10.09□□□□□ -0.79
HLCS-202ENST00000399120 FAM159AQ6UWV7 190 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 C2orf88Q9BSF0 95 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 R3HDMLQ9H3Y0 253 aa10.09□□□□□ -0.79
HLCS-202ENST00000399120 PIMREGQ9BSJ6 248 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 DCTN5Q9BTE1 182 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 FLRT3Q9NZU0 649 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 MUC1P15941 1255 aaPredicted RBP10.08□□□□□ -0.8
HLCS-202ENST00000399120 ARF6P62330 175 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 PCSK4Q6UW60 755 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 RARRES2Q99969 163 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 TMEM160Q9NX00 188 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 RBMY1BA6NDE4 496 aaKnown RBP10.08□□□□□ -0.8
HLCS-202ENST00000399120 RBMY1EA6NEQ0 496 aaKnown RBP10.08□□□□□ -0.8
HLCS-202ENST00000399120 ZNF98A6NK75 572 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 OR4C45A6NMZ5 311 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 HSPB1P04792 205 aaKnown RBP10.08□□□□□ -0.8
HLCS-202ENST00000399120 RBMY1DP0C7P1 496 aaKnown RBP10.08□□□□□ -0.8
HLCS-202ENST00000399120 RBMY1A1P0DJD3 496 aaKnown RBP10.08□□□□□ -0.8
HLCS-202ENST00000399120 RBMY1CP0DJD4 496 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 HOXB3P14651 431 aaPredicted RBP10.08□□□□□ -0.8
HLCS-202ENST00000399120 SRIP30626 198 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 MMP16P51512 607 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 RND2P52198 227 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 ZIC1Q15915 447 aa10.08□□□□□ -0.8
HLCS-202ENST00000399120 VN1R4Q7Z5H5 301 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms