RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 FAM122AQ96E09 287 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 TIMP4Q99727 224 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 TMEM204Q9BSN7 226 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 COA4Q9NYJ1 87 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 OR6C3Q9NZP0 311 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 NPY1RP25929 384 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 GNB1P62873 340 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 SSPNQ14714 243 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 SLC23A3Q6PIS1 610 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 OR4B1Q8NGF8 309 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 BCL2L2Q92843 193 aaPredicted RBP9.53□□□□□ -0.88
HPS4-202ENST00000398145 CFHR5Q9BXR6 569 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 OR1A1Q9P1Q5 309 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 TINAGQ9UJW2 476 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 LRRC3CA6NJW4 275 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 HTR1DP28221 377 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 TAS2R60P59551 318 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 SPINK14Q6IE38 97 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 CXXC4Q9H2H0 198 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 CYTL1Q9NRR1 136 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 IL36GQ9NZH8 169 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 M0R1B8 84 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 LYZL6O75951 148 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 PRSS3P2Q8NHM4 247 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 RNF2Q99496 336 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 WDR54Q9H977 334 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 IL19Q9UHD0 177 aa9.53□□□□□ -0.88
HPS4-202ENST00000398145 SPRY3O43610 288 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 RNF224P0DH78 156 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 NPBWR2P48146 333 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 GNG10P50151 68 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 NHLH1Q02575 133 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 CYP2G1PQ6ZSU1 146 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 C11orf42Q8N5U0 333 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 APC2O95996 2303 aa9.52□□□□□ -0.88
HPS4-202ENST00000398145 RALGAPA1Q6GYQ0 2036 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 MRPS11P82912 194 aaKnown RBP9.52□□□□□ -0.89
HPS4-202ENST00000398145 HES1Q14469 280 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 ALKBH6Q3KRA9 238 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 RIPPLY2Q5TAB7 128 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 FNDC7Q5VTL7 733 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 OR1L4Q8NGR5 311 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 LSM10Q969L4 123 aaKnown RBP9.52□□□□□ -0.89
HPS4-202ENST00000398145 TEX50A0A1B0GTY4 177 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 DMWDQ09019 674 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 VMA21Q3ZAQ7 101 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 C10orf128Q5T292 105 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 FAM166AQ6J272 317 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 WDFY1Q8IWB7 410 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 TIMM9Q9Y5J7 89 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 ASXL3Q9C0F0 2248 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 IGHV5-10-1A0A0J9YXX1 117 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 SIAH2O43255 324 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 CCL4P13236 92 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 UCP1P25874 307 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 CHRNB4P30926 498 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 ARSJQ5FYB0 599 aaPredicted RBP9.52□□□□□ -0.89
HPS4-202ENST00000398145 HEPN1Q6WQI6 88 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 FZR1Q9UM11 496 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 PXMP4Q9Y6I8 212 aa9.52□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BKO60814 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 NPIPB7O75200 414 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 APCSP02743 223 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BJP06899 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BOP23527 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BBP33778 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BDP58876 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BCP62807 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 TNFRSF9Q07011 255 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 AESQ08117 197 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST2H2BEQ16778 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.51□□□□□ -0.89
HPS4-202ENST00000398145 ZNF738Q8NE65 137 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BHQ93079 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 WFIKKN1Q96NZ8 548 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BNQ99877 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H2BMQ99879 126 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 CACNA1EQ15878 2313 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 IGKV3D-11A0A0A0MRZ8 115 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 NDUFA2O43678 99 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 SYNGR1O43759 233 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 SP1P08047 785 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 MEOX1P50221 254 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 MFAP2P55001 183 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 Q56UQ5 140 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 ZNF355PQ9NSJ1 428 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 DLL3Q9NYJ7 618 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 ESPL1Q14674 2120 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 OR5AL1P0C617 328 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 FAM89BQ8N5H3 189 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 CLDND2Q8NHS1 167 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 BLNKQ8WV28 456 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 NDFIP1Q9BT67 221 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 RSPO3Q9BXY4 272 aaPredicted RBP9.51□□□□□ -0.89
HPS4-202ENST00000398145 TCFL5Q9UL49 500 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 MYLKQ15746 1914 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 MGAMO43451 1857 aa9.51□□□□□ -0.89
HPS4-202ENST00000398145 LDLRAD4O15165 306 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms