RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 PLCXD3Q63HM9 321 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CISD2Q8N5K1 135 aaKnown RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 OR2C3Q8N628 320 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 SPTSSAQ969W0 71 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MAGT1Q9H0U3 335 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 TUBG2Q9NRH3 451 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 TMEM106BQ9NUM4 274 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CISD1Q9NZ45 108 aaKnown RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 HSPB7Q9UBY9 170 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ANXA10Q9UJ72 324 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 SLC7A11Q9UPY5 501 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 RBM7Q9Y580 266 aaKnown RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 LOC105371242A0A075B767 164 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 NPIPB13A6NJU9 1138 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 NPIPB4C9JG80 1138 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 IFNL4K9M1U5 179 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 PHF1O43189 567 aaPredicted RBP4.3□□□□□ -1.72
SSR1-202ENST00000397511 SYNGR4O95473 234 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 ONECUT2O95948 504 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 HRASP01112 189 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 CELA3AP09093 270 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 JMJD7P0C870 316 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 TPPP2P59282 170 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 UBE2NP61088 152 aaKnown RBP4.3□□□□□ -1.72
SSR1-202ENST00000397511 PSG4Q00888 419 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 EWSR1Q01844 656 aaKnown RBP eCLIP4.3□□□□□ -1.72
SSR1-202ENST00000397511 ZFP36L1Q07352 338 aaKnown RBP4.3□□□□□ -1.72
SSR1-202ENST00000397511 FBLN7Q53RD9 439 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 AAED1Q7RTV5 226 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 TMEM217Q8N7C4 229 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 STPG4Q8N801 248 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 TMEM105Q8N8V8 129 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 FADS6Q8N9I5 356 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 RTN4IP1Q8WWV3 396 aaPredicted RBP4.3□□□□□ -1.72
SSR1-202ENST00000397511 TNFRSF14Q92956 283 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 SMIM12Q96EX1 92 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 TXN2Q99757 166 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 IL19Q9UHD0 177 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 NAT8Q9UHE5 227 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 COX11Q9Y6N1 276 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 ARHGAP21Q5T5U3 1957 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 TTC28Q96AY4 2481 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 PINLYPA6NC86 204 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 FAM166BA8MTA8 275 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 PITX3O75364 302 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 NRASP01111 189 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 HLA-HP01893 362 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 P04436 131 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 CD55P08174 381 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 BCL2P10415 239 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 GZMHP20718 246 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 BMP5P22003 454 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 DSCR4P56555 118 aaPredicted RBP4.3□□□□□ -1.72
SSR1-202ENST00000397511 PAFAH1B2P68402 229 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 TMEM41BQ5BJD5 291 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 SLC25A53Q5H9E4 307 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 LINC00696Q6ZRV3 163 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 H1FOOQ8IZA3 346 aaPredicted RBP4.3□□□□□ -1.72
SSR1-202ENST00000397511 OR4B1Q8NGF8 309 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 OR51G1Q8NGK1 321 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 OR2T10Q8NGZ9 312 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 OR10D3Q8NH80 312 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 CMTM2Q8TAZ6 248 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 ZNF488Q96MN9 340 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 RNF2Q99496 336 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 P2RX4Q99571 388 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 CALHM2Q9HA72 323 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 DEPPQ9NTK1 212 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 PLA2G3Q9NZ20 509 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 OR6C3Q9NZP0 311 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 CRIM1Q9NZV1 1036 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 LAMTOR2Q9Y2Q5 125 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 WIPI2Q9Y4P8 454 aa4.3□□□□□ -1.72
SSR1-202ENST00000397511 IGHV2-70DA0A0C4DH43 119 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 A0A1W2PR80 420 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 CRYM-AS1A6NIL9 109 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 ZFP92A6NM28 416 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 H3BP45 60 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 M0QZ24 198 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 CTSDP07339 412 aaPredicted RBP4.29□□□□□ -1.72
SSR1-202ENST00000397511 ZNF728P0DKX0 622 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 FOLR3P41439 243 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 GPM6AP51674 278 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 HNRNPA3P51991 378 aaKnown RBP4.29□□□□□ -1.72
SSR1-202ENST00000397511 CLDN15P56746 228 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 Q0VFX4 171 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 GTF3C1Q12789 2109 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 IZUMO4Q1ZYL8 232 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 BSXQ3C1V8 233 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 TPTE2P1Q5T6R2 138 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 SP5Q6BEB4 398 aaPredicted RBP4.29□□□□□ -1.72
SSR1-202ENST00000397511 FAM89BQ8N5H3 189 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 PP6455Q8WZ26 134 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 BTF3L4Q96K17 158 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 IMMP1LQ96LU5 166 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 OR51I2Q9H344 312 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 SLC2A9Q9NRM0 540 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 FBLN5Q9UBX5 448 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 UQCR10Q9UDW1 63 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 PRSS50Q9UI38 385 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms