RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 WDR1O75083 606 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 SERF1AO75920 110 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 HBG1P69891 147 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 HBG2P69892 147 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 TMEM211Q6ICI0 200 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 ASCL4Q6XD76 172 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 KLHDC1Q8N7A1 406 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 ZNF709Q8N972 641 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 GJC3Q8NFK1 279 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 LIN37Q96GY3 246 aaPredicted RBP16.06■□□□□ 0.16
HOXC6-202ENST00000394331 WDR61Q9GZS3 305 aaKnown RBP16.06■□□□□ 0.16
HOXC6-202ENST00000394331 AKIRIN1Q9H9L7 192 aaPredicted RBP16.06■□□□□ 0.16
HOXC6-202ENST00000394331 OCIAD1Q9NX40 245 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 BET1LQ9NYM9 111 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 EYSQ5T1H1 3165 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 KIAA1324LA8MWY0 1029 aaPredicted RBP16.05■□□□□ 0.16
HOXC6-202ENST00000394331 NRASP01111 189 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 KRASP01116 189 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 IL11RAQ14626 422 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 Q6ZN92 141 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 Q6ZS49 121 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 OR5P3Q8WZ94 311 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 APH1AQ96BI3 265 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 GMPPAQ96IJ6 420 aaPredicted RBP16.05■□□□□ 0.16
HOXC6-202ENST00000394331 PATZ1Q9HBE1 687 aaKnown RBP16.05■□□□□ 0.16
HOXC6-202ENST00000394331 ZNF160Q9HCG1 818 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 ZNF586Q9NXT0 402 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 SLC33A1O00400 549 aaPredicted RBP16.05■□□□□ 0.16
HOXC6-202ENST00000394331 TRAPPC6AO75865 159 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 VAMP5O95183 116 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 C10orf128Q5T292 105 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 CLEC2AQ6UVW9 174 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 OR5B3Q8NH48 314 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 SPSB1Q96BD6 273 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 TXN2Q99757 166 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 ZDHHC11Q9H8X9 412 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 CTXND1A0A1B0GTU2 59 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 CRISP2P16562 243 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 CDCP2Q5VXM1 449 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 OR5T1Q8NG75 326 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 OR4F5Q8NH21 305 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 OR4F4Q96R69 305 aa16.05■□□□□ 0.16
HOXC6-202ENST00000394331 H0Y980 276 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 CNOT4O95628 575 aaKnown RBP16.04■□□□□ 0.16
HOXC6-202ENST00000394331 IGHEP01854 428 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 TNFSF4P23510 183 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 RHOGP84095 191 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 TMEM267Q0VDI3 215 aaPredicted RBP16.04■□□□□ 0.16
HOXC6-202ENST00000394331 RPP25LQ8N5L8 163 aaKnown RBP16.04■□□□□ 0.16
HOXC6-202ENST00000394331 PPIAL4AQ9Y536 164 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 TRIOO75962 3097 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 DIRC3C9JPN6 131 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 PNKDQ8N490 385 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 TMEM54Q969K7 222 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 SIT1Q9Y3P8 196 aa16.04■□□□□ 0.16
HOXC6-202ENST00000394331 E9PLN8 166 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 REG1AP05451 166 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 RAC2P15153 192 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 RPL19P84098 196 aaKnown RBP16.03■□□□□ 0.16
HOXC6-202ENST00000394331 SRSF7Q16629 238 aaKnown RBP eCLIP16.03■□□□□ 0.16
HOXC6-202ENST00000394331 HLA-BQ31612 363 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 PIGTQ969N2 578 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 MRPL27Q9P0M9 148 aaKnown RBP16.03■□□□□ 0.16
HOXC6-202ENST00000394331 FBXL7Q9UJT9 491 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 FAHP16930 419 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 FOXL2NBQ6ZUU3 175 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 GPR146Q96CH1 333 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 STARD4Q96DR4 205 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 VPS25Q9BRG1 176 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 SLC35D1Q9NTN3 355 aa16.03■□□□□ 0.16
HOXC6-202ENST00000394331 TMEM265A0A087WTH1 108 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 SAA2-SAA4A0A096LPE2 208 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 IGHV1-45A0A0A0MS14 117 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 IGHV1-69-2A0A0G2JMI3 117 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 GRIFINA4D1Z8 144 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 RNF212BA8MTL3 300 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 NPIPA2E9PIF3 369 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 NPIPA3F8WFD2 350 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 DSCR4P56555 118 aaPredicted RBP16.02■□□□□ 0.16
HOXC6-202ENST00000394331 SAMD10Q9BYL1 202 aa16.02■□□□□ 0.16
HOXC6-202ENST00000394331 CCDC85CA6NKD9 419 aa16.02■□□□□ 0.15
HOXC6-202ENST00000394331 TMEM238C9JI98 176 aa16.02■□□□□ 0.15
HOXC6-202ENST00000394331 F5H5K5 113 aa16.02■□□□□ 0.15
HOXC6-202ENST00000394331 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.02■□□□□ 0.15
HOXC6-202ENST00000394331 TCTEX1D1Q8N7M0 179 aa16.02■□□□□ 0.15
HOXC6-202ENST00000394331 IMMP1LQ96LU5 166 aa16.02■□□□□ 0.15
HOXC6-202ENST00000394331 CACNA1EQ15878 2313 aa16.02■□□□□ 0.15
HOXC6-202ENST00000394331 CCDC163A0A0D9SF12 145 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 CBY3A6NI87 242 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 RAET1LQ5VY80 246 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 SIGLECL1Q8N7X8 197 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 TAF15Q92804 592 aaKnown RBP eCLIP16.01■□□□□ 0.15
HOXC6-202ENST00000394331 PIGLQ9Y2B2 252 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 DHHO43323 396 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 GPX1P07203 203 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 LIFP15018 202 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 OCIAD2Q56VL3 154 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 IL36GQ9NZH8 169 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 IGHV2-26A0A0B4J1V2 119 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 CELA2AP08217 269 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms