RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 JAM3Q9BX67 310 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 MBNL3Q9NUK0 354 aaKnown RBP13.03□□□□□ -0.32
HMGN1-203ENST00000380748 G3V2T6 193 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 H0YJW9 148 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 ST8SIA5O15466 376 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 YPEL1O60688 119 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 MAS1P04201 325 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 T-ENOLP0DO92 83 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 ZNF93P35789 620 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-203ENST00000380748 FLOT2Q14254 428 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 PSG5Q15238 335 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 LGALS9CQ6DKI2 356 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 ZNF343Q6P1L6 599 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 ACBD7Q8N6N7 88 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 BVESQ8NE79 360 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 OR2AK2Q8NG84 335 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 YPEL2Q96QA6 119 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 ALG8Q9BVK2 526 aa13.02□□□□□ -0.33
HMGN1-203ENST00000380748 PARP12Q9H0J9 701 aaKnown RBP13.02□□□□□ -0.33
HMGN1-203ENST00000380748 PAK1IP1Q9NWT1 392 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-203ENST00000380748 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-203ENST00000380748 OR5H14A6NHG9 310 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 H7C2Y5 167 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 RPSAP08865 295 aaKnown RBP13.01□□□□□ -0.33
HMGN1-203ENST00000380748 HTD2P86397 168 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 FXYD3Q14802 87 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 GUCA2BQ16661 112 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 FAM71F2Q6NXP2 309 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 LHFPL3Q86UP9 236 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 GABARAPL1Q9H0R8 117 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 TMEM138Q9NPI0 162 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 KCNIP1Q9NZI2 227 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 PEMTQ9UBM1 199 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 ENOPH1Q9UHY7 261 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 WASHC3Q9Y3C0 194 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 PEX16Q9Y5Y5 336 aa13.01□□□□□ -0.33
HMGN1-203ENST00000380748 UBE2QL1A1L167 161 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 SLC22A1O15245 554 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 ZNF780AO75290 641 aaPredicted RBP13□□□□□ -0.33
HMGN1-203ENST00000380748 SC5DO75845 299 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 RBBP9O75884 186 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 CALB2P22676 271 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 SSBP2P81877 361 aaPredicted RBP13□□□□□ -0.33
HMGN1-203ENST00000380748 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 DMKNQ6E0U4 476 aaPredicted RBP13□□□□□ -0.33
HMGN1-203ENST00000380748 DYNLRB2Q8TF09 96 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 GHSRQ92847 366 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 KCTD12Q96CX2 325 aaKnown RBP13□□□□□ -0.33
HMGN1-203ENST00000380748 GGTLC1Q9BX51 225 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 GABARAPL3Q9BY60 117 aa13□□□□□ -0.33
HMGN1-203ENST00000380748 AIREO43918 545 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 RBMXL2O75526 392 aaKnown RBP12.99□□□□□ -0.33
HMGN1-203ENST00000380748 EDN2P20800 178 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 AADACP22760 399 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 MC5RP33032 325 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 TNFRSF9Q07011 255 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 DEFB114Q30KQ6 69 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 LYG2Q86SG7 212 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 ZNF554Q86TJ5 538 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 SYS1Q8N2H4 156 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 MRPL30Q8TCC3 161 aaKnown RBP12.99□□□□□ -0.33
HMGN1-203ENST00000380748 ORAI1Q96D31 301 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 WDR89Q96FK6 387 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-203ENST00000380748 TINAGL1Q9GZM7 467 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-203ENST00000380748 MED4Q9NPJ6 270 aa12.99□□□□□ -0.33
HMGN1-203ENST00000380748 FAT2Q9NYQ8 4349 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 RAB29O14966 203 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 CA11O75493 328 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 PPP3R1P63098 170 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 ATP6AP1Q15904 470 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 ZDHHC13Q8IUH4 622 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 OR5AN1Q8NGI8 311 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 GALMQ96C23 342 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 LGALS12Q96DT0 336 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 ZNF184Q99676 751 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-203ENST00000380748 RNF5Q99942 180 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 ZC4H2Q9NQZ6 224 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 PIPOXQ9P0Z9 390 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 EXOGQ9Y2C4 368 aaKnown RBP12.98□□□□□ -0.33
HMGN1-203ENST00000380748 GMPPBQ9Y5P6 360 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 SELENOKQ9Y6D0 94 aa12.98□□□□□ -0.33
HMGN1-203ENST00000380748 A0A0B4J203 849 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 H3BNX3 289 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 BMPR1BO00238 502 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 NDUFB8O95169 186 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 IGKV1-16P04430 117 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 CD2P06729 351 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 BDKRB2P30411 391 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 GTF2A1P52655 376 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-203ENST00000380748 PRR20EP86478 221 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 PRR20CP86479 221 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 PRR20DP86480 221 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 PRR20BP86481 221 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 PRR20AP86496 221 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 SNAPC3Q92966 411 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 MRPL48Q96GC5 212 aaKnown RBP12.97□□□□□ -0.33
HMGN1-203ENST00000380748 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 BANF2Q9H503 90 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 IMPAD1Q9NX62 359 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms