RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 MS4A3Q96HJ5 214 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 RSG1Q9BU20 258 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 TNFRSF19Q9NS68 423 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 FAM206AQ9NX38 181 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 MFAP2P55001 183 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 UCNP55089 124 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 NSUN5P2Q63ZY6 315 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 MRPL37Q9BZE1 423 aaKnown RBP13.86□□□□□ -0.19
COL2A1-202ENST00000380518 ECSCRQ19T08 205 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 LRRC75BQ2VPJ9 315 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 KRTCAP3Q53RY4 240 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 GBGT1Q8N5D6 347 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 TMEM171Q8WVE6 324 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 CYB5R3P00387 301 aaPredicted RBP13.86□□□□□ -0.19
COL2A1-202ENST00000380518 F12P00748 615 aaPredicted RBP13.86□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 J3KRW8 73 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 MEF2BQ02080 365 aaPredicted RBP13.85□□□□□ -0.19
COL2A1-202ENST00000380518 SLC35E4Q6ICL7 350 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 LMX1BO60663 402 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 RHBDL1O75783 438 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 HSPB1P04792 205 aaKnown RBP13.85□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF645Q8N7E2 425 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 RABAC1Q9UI14 185 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 CEACAM18A8MTB9 384 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 A8MWL6 223 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 GUCA2BQ16661 112 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 LOXL4Q96JB6 756 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 P2RX4Q99571 388 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 SCNM1Q9BWG6 230 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 TRIP12Q14669 1992 aaPredicted RBP13.85□□□□□ -0.19
COL2A1-202ENST00000380518 IGHV3-21A0A0B4J1V1 117 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 FCARP24071 287 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 PAFAH1B2P68402 229 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 CALHM1Q8IU99 346 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF383Q8NA42 475 aa13.85□□□□□ -0.19
COL2A1-202ENST00000380518 TMSB15BA0A087X1C1 80 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF137PP52743 207 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 CXorf66Q5JRM2 361 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-202ENST00000380518 AQP10Q96PS8 301 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 PCGF1Q9BSM1 259 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 OPN3Q9H1Y3 402 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-202ENST00000380518 ZMAT5Q9UDW3 170 aaKnown RBP13.84□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF831Q5JPB2 1677 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 COL24A1Q17RW2 1714 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 CKAP5Q14008 2032 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 IGKV1D-42A0A075B6H8 117 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 PGLYRP1O75594 196 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-202ENST00000380518 C1QL1O75973 258 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 MT-ND6P03923 174 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF735P0CB33 412 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 PSMB2P49721 201 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 ITLN1Q8WWA0 313 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 SOSTQ9BQB4 213 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 PKIAP61925 76 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 LINC01590Q5TEZ4 76 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 DLL3Q9NYJ7 618 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
COL2A1-202ENST00000380518 FAM90A26D6RGX4 464 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 FAM216AQ8WUB2 273 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 FGF11Q92914 225 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 AP5S1Q9NUS5 200 aa13.84□□□□□ -0.19
COL2A1-202ENST00000380518 NDUFB4O95168 129 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 ACAA1P09110 424 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 IGLV3-21P80748 117 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 SAXO1Q8IYX7 474 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 FGFRL1Q8N441 504 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 MYOZ3Q8TDC0 251 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 SAP25Q8TEE9 199 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 TAF15Q92804 592 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 GVINP1Q7Z2Y8 2422 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 MGPP08493 103 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 LINC00869P0C866 280 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 COX5BP10606 129 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 RPL24P83731 157 aaKnown RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 ZXDCQ2QGD7 858 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 PUSL1Q8N0Z8 303 aaKnown RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 OR8G5Q8NG78 346 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 WNT2BQ93097 391 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 ZNF638Q14966 1978 aaKnown RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 A6NDN8 102 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 SFTPCP11686 197 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 CD99P14209 185 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 RPL8P62917 257 aaKnown RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 SPANXN1Q5VSR9 72 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 PQLC2Q6ZP29 291 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 ZNF826PQ6ZT77 177 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 MMD2Q8IY49 270 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 OR8A1Q8NGG7 326 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 VN1R17PQ8TDU5 208 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 SCARF2Q96GP6 870 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 PAM16Q9Y3D7 125 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 HKR1P10072 659 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 HTN1P15515 57 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 HOXA4Q00056 320 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-202ENST00000380518 SNAI3Q3KNW1 292 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 PRNTQ86SH4 94 aa13.83□□□□□ -0.2
COL2A1-202ENST00000380518 CACNA1IQ9P0X4 2223 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms