RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 RTN4RQ9BZR6 473 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 GP6Q9HCN6 339 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 MMP25Q9NPA2 562 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 CACNA1IQ9P0X4 2223 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 PSMB11A5LHX3 300 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 ANKRD30BLA7E2S9 258 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 H7C1C5 153 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 USF1P22415 310 aaPredicted RBP8.02□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF136P52737 540 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
PTPRA-204ENST00000380393 IGFBP7Q16270 282 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 ALKBH6Q3KRA9 238 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 DOLPP1Q86YN1 238 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 PLPPR1Q8TBJ4 325 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 PPP1R14AQ96A00 147 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 WDR34Q96EX3 536 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 KCNS1Q96KK3 526 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 JMJD8Q96S16 334 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 ST6GALNAC5Q9BVH7 336 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 PNRC2Q9NPJ4 139 aaKnown RBP8.02□□□□□ -1.13
PTPRA-204ENST00000380393 CD207Q9UJ71 328 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 LRP5LA4QPB2 252 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 FCN1O00602 326 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 NDUFB2O95178 105 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 GLI4P10075 376 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 SLC25A6P12236 298 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 OTX2P32243 289 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 ARFRP1Q13795 201 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 PRR31Q5SQ13 230 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 SLC25A34Q6PIV7 304 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 C19orf35Q6ZS72 473 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 OR52E5Q8NH55 327 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 MRPL30Q8TCC3 161 aaKnown RBP8.02□□□□□ -1.13
PTPRA-204ENST00000380393 OVCA2Q8WZ82 227 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 KLHDC7BQ96G42 594 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 TAAR3PQ9P1P4 343 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 PHF3Q92576 2039 aaKnown RBP8.02□□□□□ -1.13
PTPRA-204ENST00000380393 EML5Q05BV3 1969 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 hCG_38984A0A1B0GV85 526 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF324O75467 553 aaPredicted RBP8.02□□□□□ -1.13
PTPRA-204ENST00000380393 GPR12P47775 334 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 Q6ZNB5 142 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 SUMF1Q8NBK3 374 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 OR5A1Q8NGJ0 315 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF764Q96H86 408 aaPredicted RBP8.02□□□□□ -1.13
PTPRA-204ENST00000380393 PECRQ9BY49 303 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 PLA2G2FQ9BZM2 168 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 KCNIP1Q9NZI2 227 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 WNT16Q9UBV4 365 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 C2orf16Q68DN1 1984 aa8.02□□□□□ -1.13
PTPRA-204ENST00000380393 A0A1W2PS18 150 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 PGPEP1LA6NFU8 196 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 C1QTNF9BB2RNN3 333 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 AGFG2O95081 481 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 HLA-DQA2P01906 255 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 IGFBP2P18065 325 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 HIST1H1TP22492 207 aaPredicted RBP8.01□□□□□ -1.13
PTPRA-204ENST00000380393 SSTR5P35346 364 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 CFHR2P36980 270 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 LINC01590Q5TEZ4 76 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 TMEFF1Q8IYR6 380 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 OR10AG1Q8NH19 301 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 OR4F5Q8NH21 305 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF418Q8TF45 676 aaPredicted RBP8.01□□□□□ -1.13
PTPRA-204ENST00000380393 GMPPAQ96IJ6 420 aaPredicted RBP8.01□□□□□ -1.13
PTPRA-204ENST00000380393 HSPB8Q9UJY1 196 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 SPCS1Q9Y6A9 102 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 COL4A4P53420 1690 aaPredicted RBP8.01□□□□□ -1.13
PTPRA-204ENST00000380393 A0A087X0K7 114 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 UQCRFS1P47985 274 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 TMPRSS3P57727 454 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 FOXL1Q12952 345 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 UNC119Q13432 240 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 ABHD17CQ6PCB6 329 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 AMZ2Q86W34 360 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 TMEM252Q8N6L7 170 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 OR5D14Q8NGL3 314 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 ELOVL3Q9HB03 270 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 ARL2-SNX15V9GYD0 113 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 OBSL1O75147 1896 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 C4orf51C9J302 202 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 LTBRP36941 435 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 THBS3P49746 956 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF547Q8IVP9 402 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 FGF14Q92915 247 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 RALYQ9UKM9 306 aaKnown RBP8.01□□□□□ -1.13
PTPRA-204ENST00000380393 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 MPDZO75970 2070 aa8.01□□□□□ -1.13
PTPRA-204ENST00000380393 A0A0A6YYD5 115 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 C9orf118A6NHY6 69 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 H0YJW9 148 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 M0QXV9 152 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 CEACAM5P06731 702 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 SRFP11831 508 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 CCL7P80098 99 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 PARM1Q6UWI2 310 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 RCHY1Q96PM5 261 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 PKIBQ9C010 78 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 WDR61Q9GZS3 305 aaKnown RBP8□□□□□ -1.13
PTPRA-204ENST00000380393 VCX2Q9H322 139 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms