RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 OR2J3O76001 311 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 RAB5AP20339 215 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 CRYBA2P53672 197 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 PAFAH1B2P68402 229 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 PSG5Q15238 335 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 WASHC3Q9Y3C0 194 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 SCN5AQ14524 2016 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 TMEM218A2RU14 115 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 C10orf113Q5VZT2 155 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 VWA1Q6PCB0 445 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 LHFPL5Q8TAF8 219 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 MMP9P14780 707 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 TMEM222Q9H0R3 208 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 A0A0G2JMM0 328 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 A0A1W2PPB8 328 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 A0A1W2PRS3 328 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 KIR3DP1A8MWS1 328 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 IGHV1-69-2A0A0G2JMI3 117 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 ZNF716A6NP11 495 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 GFRA1P56159 465 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 SLC24A4Q8NFF2 622 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 OR1L1Q8NH94 360 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 HILPDAQ9Y5L2 63 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 HSBP1O75506 76 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 APOBEC3AP31941 199 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 PNRC1Q12796 327 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 ZNF345Q14585 488 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 OR5P3Q8WZ94 311 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 GALR1P47211 349 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 RHOVQ96L33 236 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 JPT1Q9UK76 154 aa15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 EP300Q09472 2414 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-202ENST00000377298 IGKV3-7A0A075B6H7 116 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 TRAV20A0A0B4J274 112 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 LINC00271P0C7V0 271 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 FA2HQ7L5A8 372 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 MMD2Q8IY49 270 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 FAM103A1Q9BTL3 118 aaKnown RBP15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 PPIAL4CA0A0B4J2A2 164 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 ERVH48-1M5A8F1 160 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 SEC11BP0C7V7 166 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 PPIAL4GP0DN37 164 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 CEBPDP49716 269 aaPredicted RBP15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 SPCS3P61009 180 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 GAMTQ14353 236 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 C17orf82Q86X59 251 aaPredicted RBP15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 TRAPPC1Q9Y5R8 145 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 CCDC88CQ9P219 2028 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 TMEM14DPA8MWL7 114 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 CNOT1A5YKK6 2376 aaKnown RBP15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 CFHR1Q03591 330 aa15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 DHRS7BQ6IAN0 325 aaPredicted RBP15.34■□□□□ 0.05
CLSTN1-202ENST00000377298 ZNF729A6NN14 1252 aaPredicted RBP15.33■□□□□ 0.05
CLSTN1-202ENST00000377298 C11orf94C9JXX5 98 aa15.33■□□□□ 0.05
CLSTN1-202ENST00000377298 SLC35E3Q7Z769 313 aa15.33■□□□□ 0.05
CLSTN1-202ENST00000377298 CALHM1Q8IU99 346 aa15.33■□□□□ 0.05
CLSTN1-202ENST00000377298 LINC01560Q8TB33 94 aa15.33■□□□□ 0.05
CLSTN1-202ENST00000377298 SMPD2O60906 423 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 MEOX2P50222 304 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 PDLIM4P50479 330 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 SLC35B1P78383 322 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 HOXA4Q00056 320 aaPredicted RBP15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 FAM27E3Q08E93 113 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 LRRC75AQ8NAA5 344 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 IGLV3-32A0A0A0MS00 114 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 CECR9P0C854 216 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 VSIG10L2P0DP72 767 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 NAT8Q9UHE5 227 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 VAX2Q9UIW0 290 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 DOCK6Q96HP0 2047 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 CDRT15L2A8MXV6 281 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 CORTO00230 105 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 HTR1DP28221 377 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 WDYHV1Q96HA8 205 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 NPAS1Q99742 590 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 NAT8BQ9UHF3 227 aa15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 YTHDF2Q9Y5A9 579 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-202ENST00000377298 ACSF3Q4G176 576 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 FAM24BQ8N5W8 94 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 NPVFQ9HCQ7 196 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 RABAC1Q9UI14 185 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 TNFSF18Q9UNG2 199 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 PITX3O75364 302 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 APELAP0DMC3 54 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 MUC1P15941 1255 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 ANKRD55Q3KP44 614 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 CTXND1A0A1B0GTU2 59 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 OR9G1Q8NH87 305 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 TMPRSS5Q9H3S3 457 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 ZNF318Q5VUA4 2279 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 PGLYRP1O75594 196 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 CD40P25942 277 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 RPL8P62917 257 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 KHDC3LQ587J8 217 aa15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 NOL4LQ96MY1 436 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-202ENST00000377298 hCG_38984A0A1B0GV85 526 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 KLF7O75840 302 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 RCC1P18754 421 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 CD1BP29016 333 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms