RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 BCL6BQ8N143 479 aaPredicted RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SPICQ8N5J4 248 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ADAD2Q8NCV1 583 aaKnown RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR52L2PQ8NGH6 319 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RFESDQ8TAC1 157 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 UBALD1Q8TB05 177 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 H1FXQ92522 213 aaKnown RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TOMM40LQ969M1 308 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 NEIL1Q96FI4 390 aaPredicted RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SEC22CQ9BRL7 303 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RSRP1Q9BUV0 290 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TOLLIPQ9H0E2 274 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MED28Q9H204 178 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C5orf66Q9H5L9 145 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TAS2R3Q9NYW6 316 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CALYQ9NYX4 217 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR1A1Q9P1Q5 309 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CTSZQ9UBR2 303 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CLN8Q9UBY8 286 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 UBE2J1Q9Y385 318 aaPredicted RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR2W1Q9Y3N9 320 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 VWFP04275 2813 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 F2RL2O00254 374 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SSNA1O43805 119 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CREBL2O60519 120 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 FCN3O75636 299 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TRAPPC2P0DI81 140 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TRAPPC2BP0DI82 140 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RPS2P15880 293 aaKnown RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SSTR5P35346 364 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LUMP51884 338 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RRAS2P62070 204 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 DHODHQ02127 395 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 BAMBIQ13145 260 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C17orf58Q2M2W7 97 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TUSC1Q2TAM9 212 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ABCA11PQ4W5N1 156 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TMEM128Q5BJH2 165 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 KLF17Q5JT82 389 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TMEM200BQ69YZ2 307 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C11orf88Q6PI97 169 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF841Q6ZN19 808 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 FGFRL1Q8N441 504 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR8B3Q8NGG8 313 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR10V1Q8NGI7 309 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF431Q8TF32 576 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CAPSLQ8WWF8 208 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF486Q96H40 463 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF48Q96MX3 618 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR8B2Q96RD0 313 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SLC5A7Q9GZV3 580 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 FXYD6Q9H0Q3 95 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LINC00574Q9H8X3 128 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PATZ1Q9HBE1 687 aaKnown RBP8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR2S2Q9NQN1 319 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MMP26Q9NRE1 261 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C19orf12Q9NSK7 152 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RDH8Q9NYR8 311 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LINC00312Q9Y6C7 94 aa8.95□□□□□ -0.98
HLA-DQA1-202ENST00000374949 WNK1Q9H4A3 2382 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TRBV23-1A0A0A0MS06 115 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MEX3AA1L020 520 aaKnown RBP8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C9orf170A2RU37 121 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RGS11O94810 467 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PI3P19957 117 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TMEM30BQ3MIR4 351 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CD276Q5ZPR3 534 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF626Q68DY1 528 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LYG2Q86SG7 212 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 FAM185AQ8N0U4 392 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR10A7Q8NGE5 316 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SECTM1Q8WVN6 248 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GAL3ST2Q9H3Q3 398 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 IDI2-AS1Q9NZ38 188 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF221Q9UK13 617 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 JPT1Q9UK76 154 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 NUP50Q9UKX7 468 aa8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RBM7Q9Y580 266 aaKnown RBP8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PRKDCP78527 4128 aaKnown RBP8.94□□□□□ -0.98
HLA-DQA1-202ENST00000374949 IGHV3OR16-10A0A075B7F0 116 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 IGHV3-43A0A0B4J1X8 118 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 IGKV1D-13A0A0B4J2D9 117 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TEX13DA0A0J9YY54 714 aaPredicted RBP8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GPR31O00270 319 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 YPEL1O60688 119 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 FOXH1O75593 365 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SFT2D2O95562 160 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RNASE1P07998 156 aaKnown RBP8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 IGHV3-43DP0DP04 118 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 IGKV1-13P0DP09 117 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 S100GP29377 79 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GNRHRP30968 328 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PIGPP57054 158 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 DHRS2Q13268 280 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PPP1R1AQ13522 171 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LTC4SQ16873 150 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MORN2Q502X0 79 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 WDR25Q64LD2 544 aaPredicted RBP8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 AKAP14Q86UN6 197 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SGPP2Q8IWX5 399 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms