RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 LFNGQ8NES3 379 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 OR5A2Q8NGI9 324 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 HPSE2Q8WWQ2 592 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 NRGNQ92686 78 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 NOL4LQ96MY1 436 aaPredicted RBP12.05□□□□□ -0.48
HMGA1-203ENST00000374116 HIST1H2AAQ96QV6 131 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 MRPL37Q9BZE1 423 aaKnown RBP12.05□□□□□ -0.48
HMGA1-203ENST00000374116 SLC35B3Q9H1N7 401 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 OBP2BQ9NPH6 170 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 FAM212BQ9NTI7 297 aaPredicted RBP12.05□□□□□ -0.48
HMGA1-203ENST00000374116 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 AGPAT2O15120 278 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 TGOLN2O43493 480 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 OR2C1O95371 312 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 PTBP3O95758 552 aaKnown RBP12.04□□□□□ -0.48
HMGA1-203ENST00000374116 IGLV1-44P01699 117 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 SEC11BP0C7V7 166 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 BCL3P20749 454 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 FCGR2CP31995 323 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 GPM6AP51674 278 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 PIGPP57054 158 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 FGF12P61328 243 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 RAB32Q13637 225 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 GAMTQ14353 236 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 HNF4GQ14541 408 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 CLINT1Q14677 625 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 SRSF7Q16629 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
HMGA1-203ENST00000374116 ABCA11PQ4W5N1 156 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 TMEM108Q6UXF1 575 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 Q6ZS49 121 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 OR5L1Q8NGL2 311 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 OR10D4PQ8NGN7 298 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 STRAPQ9Y3F4 350 aaKnown RBP12.04□□□□□ -0.48
HMGA1-203ENST00000374116 FAM221AA4D161 298 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 CD300LBA8K4G0 201 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 ZNF732B4DXR9 585 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 PPP1R2P9O14990 202 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 ARG1P05089 322 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 DANCRP0C864 163 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 NDUFA6P56556 154 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 MPV17LQ2QL34 196 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 TOMM40LQ969M1 308 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 PBDC1Q9BVG4 233 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 NAA60Q9H7X0 242 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 NGBQ9NPG2 151 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 GSKIPQ9P0R6 139 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 MPC1Q9Y5U8 109 aa12.04□□□□□ -0.48
HMGA1-203ENST00000374116 ABCA12Q86UK0 2595 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 IGHV2OR16-5A0A0B4J2B6 119 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 ANKRD30BLA7E2S9 258 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 TRAPPC2LH3BP13 241 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 CD3EP07766 207 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 DAOP14920 347 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 PDCD1Q15116 288 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 IAH1Q2TAA2 248 aaPredicted RBP12.03□□□□□ -0.48
HMGA1-203ENST00000374116 MIDNQ504T8 468 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 ANKRD39Q53RE8 183 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 VHLLQ6RSH7 139 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 MISP3Q96FF7 219 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 SYT3Q9BQG1 590 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 NDUFAF3Q9BU61 184 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 SUCNR1Q9BXA5 334 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 ZDHHC8Q9ULC8 765 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 PLCE1Q9P212 2302 aa12.03□□□□□ -0.48
HMGA1-203ENST00000374116 SHISA9B4DS77 424 aa12.02□□□□□ -0.48
HMGA1-203ENST00000374116 J3QW42 95 aa12.02□□□□□ -0.48
HMGA1-203ENST00000374116 RPS10P46783 165 aaKnown RBP12.02□□□□□ -0.48
HMGA1-203ENST00000374116 KHDC3LQ587J8 217 aa12.02□□□□□ -0.48
HMGA1-203ENST00000374116 LINC00596Q86U02 117 aa12.02□□□□□ -0.48
HMGA1-203ENST00000374116 LRTM2Q8N967 370 aa12.02□□□□□ -0.48
HMGA1-203ENST00000374116 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.48
HMGA1-203ENST00000374116 OR5P3Q8WZ94 311 aa12.02□□□□□ -0.48
HMGA1-203ENST00000374116 PLK3Q9H4B4 646 aa12.02□□□□□ -0.48
HMGA1-203ENST00000374116 UNKLQ9H9P5 680 aaKnown RBP12.02□□□□□ -0.48
HMGA1-203ENST00000374116 SIRT7Q9NRC8 400 aa12.02□□□□□ -0.48
HMGA1-203ENST00000374116 OR5B21A6NL26 309 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST1H2BKO60814 126 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 CRYAAP02489 173 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST1H2BJP06899 126 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST1H2BOP23527 126 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST1H2BBP33778 126 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST1H2BDP58876 126 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 FXYD4P59646 89 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 S100A10P60903 97 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 ERVS71-1P61550 626 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HERV-K104P61576 105 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST1H2BCP62807 126 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 NHLH2Q02577 135 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 TMEM187Q14656 261 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST2H2BEQ16778 126 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.02□□□□□ -0.49
HMGA1-203ENST00000374116 GGNBP1Q5YKI7 109 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 CLEC9AQ6UXN8 241 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 Q6ZPA2 131 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 CCDC71LQ8N9Z2 235 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 BHLHE23Q8NDY6 225 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 OR8G5Q8NG78 346 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST1H2BHQ93079 126 aa12.02□□□□□ -0.49
HMGA1-203ENST00000374116 HIST1H2BNQ99877 126 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms