RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 HAX1O00165 279 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 SIGLEC14Q08ET2 396 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 HSPB7Q9UBY9 170 aa15.92■□□□□ 0.14
SHANK1-202ENST00000359082 SF3B6Q9Y3B4 125 aaKnown RBP15.92■□□□□ 0.14
SHANK1-202ENST00000359082 CYB5R3P00387 301 aaPredicted RBP15.91■□□□□ 0.14
SHANK1-202ENST00000359082 SCTP09683 121 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 CA11O75493 328 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 BCL2P10415 239 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 CKS2P33552 79 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 SSTR5P35346 364 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 OR2A4O95047 310 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 OR2A7Q96R45 310 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 FOXS1O43638 330 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 ZNF79Q15937 498 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 PRSS27Q9BQR3 290 aa15.91■□□□□ 0.14
SHANK1-202ENST00000359082 DLL1O00548 723 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 ITLN1Q8WWA0 313 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 SIPA1L3O60292 1781 aaPredicted RBP15.9■□□□□ 0.14
SHANK1-202ENST00000359082 IRF3Q14653 427 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 IGKV3OR2-268A0A0C4DH90 116 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 GCGP01275 180 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 LINC00869P0C866 280 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 VSIG10L2P0DP72 767 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 FAM209AQ5JX71 171 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 ZNF826PQ6ZT77 177 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 H1FOOQ8IZA3 346 aaPredicted RBP15.9■□□□□ 0.14
SHANK1-202ENST00000359082 MS4A3Q96HJ5 214 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 HSPB9Q9BQS6 159 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 A0A0J9YW62 118 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 HINT1P49773 126 aaPredicted RBP15.9■□□□□ 0.14
SHANK1-202ENST00000359082 UNQ5815/PRO19632Q6UWF5 114 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 SCN9AQ15858 1988 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 NUP205Q92621 2012 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 FCGR2BP31994 310 aaPredicted RBP15.9■□□□□ 0.14
SHANK1-202ENST00000359082 LY6EQ16553 131 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 CALHM1Q8IU99 346 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 DIRC2Q96SL1 478 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 SCNM1Q9BWG6 230 aa15.9■□□□□ 0.14
SHANK1-202ENST00000359082 FADS6Q8N9I5 356 aa15.89■□□□□ 0.14
SHANK1-202ENST00000359082 MOB4Q9Y3A3 225 aa15.89■□□□□ 0.14
SHANK1-202ENST00000359082 ID4P47928 161 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 FAM3BP58499 235 aaPredicted RBP15.89■□□□□ 0.13
SHANK1-202ENST00000359082 ZNF345Q14585 488 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 DCAF12L2Q5VW00 463 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 ABCA3Q99758 1704 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 ZNF831Q5JPB2 1677 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 PRSS23O95084 383 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 REG1AP05451 166 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 MUC1P15941 1255 aaPredicted RBP15.89■□□□□ 0.13
SHANK1-202ENST00000359082 OR4B1Q8NGF8 309 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 RAXQ9Y2V3 346 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 CCL27Q9Y4X3 112 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 NPIPB6E9PJ23 425 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 H0Y980 276 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 K7ERU9 68 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 ZNF658BQ4V348 819 aaPredicted RBP15.89■□□□□ 0.13
SHANK1-202ENST00000359082 SIRT4Q9Y6E7 314 aaPredicted RBP15.89■□□□□ 0.13
SHANK1-202ENST00000359082 DSPPQ9NZW4 1301 aa15.89■□□□□ 0.13
SHANK1-202ENST00000359082 SIGLEC5O15389 551 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 C1QCP02747 245 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 FGF12P61328 243 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 PMS2CLQ68D20 193 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 A0A1W2PPC1 479 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 A0A1W2PS18 150 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 PTP4A3O75365 173 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 OTX1P32242 354 aaPredicted RBP15.88■□□□□ 0.13
SHANK1-202ENST00000359082 GCSAMQ8N6F7 178 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 TMEM238LA0A1B0GVL6 79 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 PGPA6NDG6 321 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 A6NJY4 79 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 WNT9BO14905 357 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 CXCL2P19875 107 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 COL5A1-AS1Q5SY13 56 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 LSM10Q969L4 123 aaKnown RBP15.88■□□□□ 0.13
SHANK1-202ENST00000359082 DUX5Q96PT3 197 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 KCNK7Q9Y2U2 307 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 ZP4Q12836 540 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 FXYD3Q14802 87 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 C1QAP02745 245 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 AMY1AP04745 511 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 LGALS3P17931 250 aaKnown RBP15.88■□□□□ 0.13
SHANK1-202ENST00000359082 C1QTNF12Q5T7M4 302 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 PQLC2Q6ZP29 291 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 DDB2Q92466 427 aa15.88■□□□□ 0.13
SHANK1-202ENST00000359082 MGST3O14880 152 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 KLK2P20151 261 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 CX3CL1P78423 397 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 ISXQ2M1V0 245 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 CDC42EP3Q9UKI2 254 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 TMEM56-RWDD3S4R434 201 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 A8MWL6 223 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 LMX1BO60663 402 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 SFTPCP11686 197 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 DLX6P56179 175 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 MIC13Q5XKP0 118 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 C8orf82Q6P1X6 216 aaPredicted RBP15.87■□□□□ 0.13
SHANK1-202ENST00000359082 LEAP2Q969E1 77 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 HIST1H4GQ99525 98 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 PIMREGQ9BSJ6 248 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 ANOS1P23352 680 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms