RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SRYQ05066 204 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 MRPL49Q13405 166 aaKnown RBP7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 Q5PR19 223 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 SLC23A3Q6PIS1 610 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 WDR74Q6RFH5 385 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 H1FOOQ8IZA3 346 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM54Q969K7 222 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 RPUSD4Q96CM3 377 aaKnown RBP7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 C10orf35Q96D05 121 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 SMIM12Q96EX1 92 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF488Q96MN9 340 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 FOXB1Q99853 325 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 MAP1LC3BQ9GZQ8 125 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 RPRMQ9NS64 109 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 OCIAD1Q9NX40 245 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 LAMTOR2Q9Y2Q5 125 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGLV3-12A0A075B6K2 115 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 A0A1W2PQM1 296 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZIC3O60481 467 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 VDAC1P21796 283 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 GALR1P47211 349 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 RPS16P62249 146 aaKnown RBP7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 FAM90A2PQ658T7 463 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 CFAP161Q6P656 301 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 VN1R17PQ8TDU5 208 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 GUCD1Q96NT3 240 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 IMMP2LQ96T52 175 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 TXN2Q99757 166 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ATP5SQ99766 215 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 CACNA1DQ01668 2161 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 KIAA2026Q5HYC2 2103 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ATG2AQ2TAZ0 1938 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 A0A0G2JRQ6 117 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF816-ZNF321PA0A0X1KG74 233 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 SLC22A20A6NK97 555 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 C10orf142B7Z368 130 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 H7BYZ3 331 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 LIFP15018 202 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 CRYGSP22914 178 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ACTL10Q5JWF8 245 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 SPANXN5Q5MJ07 72 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 TPTE2P1Q5T6R2 138 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 UNQ5815/PRO19632Q6UWF5 114 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 DPPA3Q6W0C5 159 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 Q6ZVH6 145 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM256Q8N2U0 113 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 FADS6Q8N9I5 356 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR51G1Q8NGK1 321 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ABHD3Q8WU67 409 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF845Q96IR2 970 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 CST9LQ9H4G1 147 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 KCNS2Q9ULS6 477 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGLV3-32A0A0A0MS00 114 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGHV2OR16-5A0A0B4J2B6 119 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 PSG2P11465 335 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 GZMHP20718 246 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 DSCR4P56555 118 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 TAS2R30P59541 319 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZFP36L1Q07352 338 aaKnown RBP7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 PRDX4Q13162 271 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 VAMP3Q15836 100 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGFBP7Q16270 282 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 HLA-BQ31612 363 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM41BQ5BJD5 291 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM211Q6ICI0 200 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 C16orf82Q7Z2V1 217 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF709Q8N972 641 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 APH1AQ96BI3 265 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 Q9N2K0 584 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM38BQ9NVV0 291 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 ERRFI1Q9UJM3 462 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 PPP1R3CQ9UQK1 317 aa7.03□□□□□ -1.28
CDC42SE1-201ENST00000357235 PRRC2CQ9Y520 2896 aaKnown RBP7.02□□□□□ -1.28
CDC42SE1-201ENST00000357235 A0A0G2JMM0 328 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 IGHV5-10-1A0A0J9YXX1 117 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 LOC102723971A0A1B0GUV8 181 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 A0A1W2PPB8 328 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 A0A1W2PRS3 328 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 CLEC18AA5D8T8 446 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 KIR3DP1A8MWS1 328 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 K7ERU9 68 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 BMP5P22003 454 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 SSR4P51571 173 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 HNRNPA3P51991 378 aaKnown RBP7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 PRSS8Q16651 343 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 CLEC18CQ8NCF0 446 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR6C3Q9NZP0 311 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 CACNG5Q9UF02 275 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 WIPI2Q9Y4P8 454 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 FREM1Q5H8C1 2179 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 TMEM265A0A087WTH1 108 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 hCG_38984A0A1B0GV85 526 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 LOC102725191A0A1B0GVB3 256 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 C5orf49A4QMS7 147 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 WDR1O75083 606 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 SYNGR4O95473 234 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 NBEAP1P0C6P0 100 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 S100GP29377 79 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 WIPI1Q5MNZ9 446 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 Q6ZN92 141 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms