RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 PGAM2P15259 253 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 AADACP22760 399 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 S100GP29377 79 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 FCGR2CP31995 323 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 BCAP31P51572 246 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 CCR6P51684 374 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ARHGDIBP52566 201 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 SCGB2B2Q4G0G5 96 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 OR13C8Q8NGS7 320 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 HEXA-AS1Q9H8Q6 139 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ABCB10Q9NRK6 738 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ANK2Q01484 3957 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 IGHV3-72A0A0B4J1Y9 119 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ANKRD34BA5PLL1 514 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 CENPXA8MT69 81 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 M0R1W7 72 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 CRYZL1O95825 349 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 GNRHRP30968 328 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 PPP5CP53041 499 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 FXYD4P59646 89 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 RPL30P62888 115 aaKnown RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 SCGB2A2Q13296 93 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 HES1Q14469 280 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 SSX2Q16385 188 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 DMRTA1Q5VZB9 504 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ZNF626Q68DY1 528 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 DHRS11Q6UWP2 260 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 CCBE1Q6UXH8 406 aaPredicted RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 GLDNQ6ZMI3 551 aaPredicted RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 C1orf122Q6ZSJ8 110 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 H1FOOQ8IZA3 346 aaPredicted RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 OR11H6Q8NGC7 330 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 OR51S1Q8NGJ8 323 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 CABLES2Q9BTV7 478 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 HRASLSQ9HDD0 168 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ESM1Q9NQ30 184 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 CCL28Q9NRJ3 127 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 FLVCR2Q9UPI3 526 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 LINC00473A8K010 186 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 BUB1B-PAK6H3BSN5 160 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 TNFSF12O43508 249 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 RGS11O94810 467 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 DIRAS3O95661 229 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 CD74P04233 296 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 SPNP16150 400 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 CD40LGP29965 261 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 HERV-K104P61576 105 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 HTD2P86397 168 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ZNF45Q02386 682 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 DYRK1AQ13627 763 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 DEFB112Q30KQ8 113 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 STEAP1BQ6NZ63 245 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ZNF818PQ6ZRF7 136 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 SLC25A48Q6ZT89 311 aaKnown RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 TMEM17Q86X19 198 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 OR4A4PQ8NGN8 299 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 OR10J5Q8NHC4 309 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 NANPQ8TBE9 248 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 RIMS4Q9H426 269 aaPredicted RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 EHFQ9NZC4 300 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 LPAR3Q9UBY5 353 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 SESN1Q9Y6P5 492 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 SAA2-SAA4A0A096LPE2 208 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 IGHV1-69DA0A0B4J2H0 117 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 YPEL1O60688 119 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 IGHV1-69P01742 117 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ARG1P05089 322 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 SAA2P0DJI9 122 aaPredicted RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 ZBTB25P24278 435 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 KIR2DS4P43632 304 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 UBE2E1P51965 193 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 KIR2DS1Q14954 304 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 SRSF7Q16629 238 aaKnown RBP eCLIP3.24□□□□□ -1.89
LIG4-201ENST00000356922 HLA-DRB5Q30154 266 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 LHFPL1Q86WI0 220 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 TEX29Q8N6K0 151 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 OR2AK2Q8NG84 335 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 OR13D1Q8NGV5 346 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 OR5H2Q8NGV7 314 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RNASE11Q8TAA1 199 aaKnown RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 TOMM40LQ969M1 308 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 YPEL2Q96QA6 119 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 AIFM2Q9BRQ8 373 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ZNF2Q9BSG1 426 aaPredicted RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 SCPEP1Q9HB40 452 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 PRR13Q9NZ81 148 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ZNF221Q9UK13 617 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 SULT1C2O00338 296 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 NPFFO15130 113 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 PPYP01298 95 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 IGKV1-16P04430 117 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CT45A6P0DMU7 189 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CT45A5P0DMU8 189 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CT45A7P0DMV0 189 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 IL3RAP26951 378 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 FAUP35544 74 aaKnown RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 PRRX1P54821 245 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 EIF4EBP1Q13541 118 aaPredicted RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 CDK10Q15131 360 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ABCA11PQ4W5N1 156 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms