RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 OR2A4O95047 310 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 KRTCAP3Q53RY4 240 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 C1orf185Q5T7R7 199 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 DDB2Q92466 427 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 OR2A7Q96R45 310 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 IGHV5-10-1A0A0J9YXX1 117 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 NPBWR2P48146 333 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 ZAR1Q86SH2 424 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 HILPDAQ9Y5L2 63 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 CGB1A6NKQ9 187 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 MGST3O14880 152 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 SNRPCP09234 159 aaKnown RBP12.91□□□□□ -0.34
LMX1B-201ENST00000355497 CXCL2P19875 107 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 ANOS1P23352 680 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 VAX1Q5SQQ9 334 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 BHLHA9Q7RTU4 235 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 C9orf40Q8IXQ3 194 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 GUCD1Q96NT3 240 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 CCL13Q99616 98 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 TMEM70Q9BUB7 260 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 PRF1P14222 555 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 PRSS27Q9BQR3 290 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 TTTY12Q9BZ98 90 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 DDX60LQ5H9U9 1706 aaKnown RBP12.9□□□□□ -0.34
LMX1B-201ENST00000355497 VSIG10L2P0DP72 767 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 SLC25A34Q6PIV7 304 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 DSPPQ9NZW4 1301 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 IGHV3OR16-12A0A075B7B8 117 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 LNP1A1A4G5 178 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 PGPA6NDG6 321 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 CD1AP06126 327 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 DLX6P56179 175 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 PHLDA3Q9Y5J5 127 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 F11RQ9Y624 299 aaKnown RBP12.9□□□□□ -0.34
LMX1B-201ENST00000355497 TMEM183AQ8IXX5 376 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 WDR54Q9H977 334 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 KLHDC2Q9Y2U9 406 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 B4E171 279 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 CCL21O00585 134 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 NRTNQ99748 197 aa12.9□□□□□ -0.34
LMX1B-201ENST00000355497 ZNF430Q9H8G1 570 aaPredicted RBP12.9□□□□□ -0.34
LMX1B-201ENST00000355497 A0A1W2PPC1 479 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 NAT2P11245 290 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 CX3CL1P78423 397 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 ZP4Q12836 540 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 GALNT14Q96FL9 552 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 TMEM222Q9H0R3 208 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 A0A0U1RQV5 110 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 FGF12P61328 243 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 YBX2Q9Y2T7 364 aaKnown RBP12.89□□□□□ -0.35
LMX1B-201ENST00000355497 ADRA2AP08913 450 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 CACNG7P62955 275 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 MEF2BQ02080 365 aaPredicted RBP12.89□□□□□ -0.35
LMX1B-201ENST00000355497 PQLC2Q6ZP29 291 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 RTN4RQ9BZR6 473 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 MRPS18AQ9NVS2 196 aaKnown RBP12.89□□□□□ -0.35
LMX1B-201ENST00000355497 BEX4Q9NWD9 120 aaPredicted RBP12.89□□□□□ -0.35
LMX1B-201ENST00000355497 CACNA1SQ13698 1873 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 PF4V1P10720 104 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 FOLR2P14207 255 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 SSTR5P35346 364 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 DCAF12L2Q5VW00 463 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 TMEM252Q8N6L7 170 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 ZNF721Q8TF20 911 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
LMX1B-201ENST00000355497 DNAL4O96015 105 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 PRSS2P07478 247 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 TMEM177Q53S58 311 aa12.89□□□□□ -0.35
LMX1B-201ENST00000355497 PLAUP00749 431 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 FSTP19883 344 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 HCP5Q6MZN7 132 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 ZPLD1Q8TCW7 415 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 PLAC1Q9HBJ0 212 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 IGKV3D-11A0A0A0MRZ8 115 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 TGIF2-C20orf24A0A0A6YYL0 155 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 ZNF815PA8K554 130 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 IGKV3-11P04433 115 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 IGHV4-34P06331 123 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 RAB9AP51151 201 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 RPL8P62917 257 aaKnown RBP12.88□□□□□ -0.35
LMX1B-201ENST00000355497 DCAF10Q5QP82 559 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 TPRX1Q8N7U7 411 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 OR13C6PQ8NH95 151 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 C7orf66A4D0T2 115 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 C17orf51A8MQB3 221 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 KLK2P20151 261 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 PTP4A3O75365 173 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 OR2H2O95918 312 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 UCP2P55851 309 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-201ENST00000355497 OR4C13Q8NGP0 309 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 PMCHL2Q9BQD1 86 aa12.88□□□□□ -0.35
LMX1B-201ENST00000355497 NANOS3P60323 173 aaKnown RBP12.87□□□□□ -0.35
LMX1B-201ENST00000355497 CCL8P80075 99 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 GPR82Q96P67 336 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 CISD1Q9NZ45 108 aaKnown RBP12.87□□□□□ -0.35
LMX1B-201ENST00000355497 MBD1Q9UIS9 605 aaPredicted RBP12.87□□□□□ -0.35
LMX1B-201ENST00000355497 IGHV3-72A0A0B4J1Y9 119 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 S1PR2O95136 353 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms