RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 BOLLQ8N9W6 283 aaKnown RBP5.75□□□□□ -1.49
TRIM55-203ENST00000350034 ZNRF1Q8ND25 227 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 OR51H1Q8NH63 302 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 LRRC20Q8TCA0 184 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 CORO2AQ92828 525 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 ARL11Q969Q4 196 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 C14orf79Q96F83 325 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 BSCL2Q96G97 398 aaPredicted RBP5.75□□□□□ -1.49
TRIM55-203ENST00000350034 GAFA1Q96PS6 74 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 YPEL2Q96QA6 119 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 ESRP2Q9H6T0 727 aaKnown RBP5.75□□□□□ -1.49
TRIM55-203ENST00000350034 PLEKHF2Q9H8W4 249 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 LIN7CQ9NUP9 197 aaKnown RBP5.75□□□□□ -1.49
TRIM55-203ENST00000350034 OR6C3Q9NZP0 311 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 FBXL17Q9UF56 701 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 JPT1Q9UK76 154 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 GAB2Q9UQC2 676 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 PPP1R3CQ9UQK1 317 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 RNF115Q9Y4L5 304 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 ACACAQ13085 2346 aa5.75□□□□□ -1.49
TRIM55-203ENST00000350034 NBPF19A0A087WUL8 3843 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 A8MXK9 166 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 CCL21O00585 134 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 PROP1O75360 226 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 JTBO76095 146 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 TMEM50AO95807 157 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 CYB5R3P00387 301 aaPredicted RBP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 FGF2P09038 288 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 SELLP14151 372 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 LOXP28300 417 aaPredicted RBP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 PPP1CCP36873 323 aaKnown RBP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 PAX9P55771 341 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 TMEM33P57088 247 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 BRWD1-AS2P59051 145 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 POLR2GP62487 172 aaKnown RBP eCLIP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 RPL30P62888 115 aaKnown RBP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 TLE1Q04724 770 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 EDDM3AQ14507 147 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 C17orf58Q2M2W7 97 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 MORN2Q502X0 79 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 TOR2AQ5JU69 321 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 RPL7L1Q6DKI1 246 aaKnown RBP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 THOC7Q6I9Y2 204 aaKnown RBP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 ADAM5Q6NVV9 412 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 ZNF66Q6ZN08 573 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 Q6ZRM9 215 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 TCF23Q7RTU1 214 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 TGIF2LYQ8IUE0 185 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 ODF3L1Q8IXM7 274 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 ZNF295-AS1Q8N0V1 137 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 UBAC2Q8NBM4 344 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 RFESDQ8TAC1 157 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 NINJ1Q92982 152 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 PLPPR2Q96GM1 343 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 OR2D2Q9H210 308 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 ZNF665Q9H7R5 613 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 WFDC1Q9HC57 220 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 OR2S2Q9NQN1 319 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 SDHAF2Q9NX18 166 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 DCAF16Q9NXF7 216 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 COA4Q9NYJ1 87 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 CALYQ9NYX4 217 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 PLA2G2EQ9NZK7 142 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 RNF150Q9ULK6 438 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 KCNS2Q9ULS6 477 aa5.74□□□□□ -1.49
TRIM55-203ENST00000350034 RBM7Q9Y580 266 aaKnown RBP5.74□□□□□ -1.49
TRIM55-203ENST00000350034 KBTBD11-OT1A0A1B0GTJ5 212 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 A0A1B0GW55 424 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 IGSF23A1L1A6 192 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 FAM24AA6NFZ4 105 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 B9A039 149 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 TMEM178BH3BS89 294 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 SHOXO15266 292 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 SIAH2O43255 324 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 CD3EP07766 207 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 DUX4L2P0CJ85 424 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 DUX4L3P0CJ86 424 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 DUX4L4P0CJ87 422 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 DUX4L5P0CJ88 424 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 DUX4L6P0CJ89 424 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 DUX4L7P0CJ90 424 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 IRF2P14316 349 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 PVALBP20472 110 aaPredicted RBP5.73□□□□□ -1.49
TRIM55-203ENST00000350034 APOBEC3AP31941 199 aaPredicted RBP5.73□□□□□ -1.49
TRIM55-203ENST00000350034 LPAR6P43657 344 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 CCL8P80075 99 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 EWSR1Q01844 656 aaKnown RBP eCLIP5.73□□□□□ -1.49
TRIM55-203ENST00000350034 CATR1Q13166 79 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 CDSNQ15517 529 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 TMEM30BQ3MIR4 351 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 DUX4L9Q6RFH8 374 aaPredicted RBP5.73□□□□□ -1.49
TRIM55-203ENST00000350034 OR2C3Q8N628 320 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 TMEM252Q8N6L7 170 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 GALNT11Q8NCW6 608 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 RNF141Q8WVD5 230 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 EDARADDQ8WWZ3 215 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 NEUROG1Q92886 237 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 SAT2Q96F10 170 aaPredicted RBP5.73□□□□□ -1.49
TRIM55-203ENST00000350034 CCL13Q99616 98 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms