RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CTXN2P0C2S0 81 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 CTSSP25774 331 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 MRPL30Q8TCC3 161 aaKnown RBP11.24□□□□□ -0.61
CASC4-202ENST00000345795 IGFBPL1Q8WX77 278 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 MMP9P14780 707 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 ECI1P42126 302 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 MSMO1Q15800 293 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 EIF2S3LQ2VIR3 472 aaKnown RBP11.24□□□□□ -0.61
CASC4-202ENST00000345795 SELENOHQ8IZQ5 122 aaKnown RBP11.24□□□□□ -0.61
CASC4-202ENST00000345795 FRZBQ92765 325 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 CXXC4Q9H2H0 198 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 LIN7CQ9NUP9 197 aaKnown RBP11.24□□□□□ -0.61
CASC4-202ENST00000345795 ZG16O60844 167 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
CASC4-202ENST00000345795 SPRNQ5BIV9 151 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 ASCL5Q7RTU5 278 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 LHFPL4Q7Z7J7 247 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 WDR86Q86TI4 376 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 NEUROG1Q92886 237 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 OR51I2Q9H344 312 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 RIMS4Q9H426 269 aaPredicted RBP11.24□□□□□ -0.61
CASC4-202ENST00000345795 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 IGHV2OR16-5A0A0B4J2B6 119 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 C17orf98A8MV24 154 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 FGF7P21781 194 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 SRPXP78539 464 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 HES1Q14469 280 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 INO80CQ6PI98 192 aaPredicted RBP11.23□□□□□ -0.61
CASC4-202ENST00000345795 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 OR10X1Q8NGY0 326 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 ACY3Q96HD9 319 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 S1PR3Q99500 378 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 MLNRO43193 412 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 SLC25A4P12235 298 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 MYOD1P15172 320 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 HBG1P69891 147 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 HBG2P69892 147 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 HSF4Q9ULV5 492 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 WSB1Q9Y6I7 421 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 A0A1W2PPH5 198 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 VSTM5A8MXK1 200 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 CCL20P78556 96 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 NAAAQ02083 359 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 LHFPL1Q86WI0 220 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 FAM122AQ96E09 287 aa11.23□□□□□ -0.61
CASC4-202ENST00000345795 SHOXO15266 292 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 CYC1P08574 325 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 KCNJ3P48549 501 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 SLC38A11Q08AI6 406 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 AWAT1Q58HT5 328 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 OR10P1Q8NGE3 313 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 OR4F5Q8NH21 305 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 OR4F4Q96R69 305 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 SAP30LQ9HAJ7 183 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 FANCFQ9NPI8 374 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 RAXQ9Y2V3 346 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 WIPI2Q9Y4P8 454 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 IGHV1-18A0A0C4DH31 117 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 LY6DQ14210 128 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 DHRS11Q6UWP2 260 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 ABHD12Q8N2K0 398 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 TMEM45BQ96B21 275 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 TVP23CQ96ET8 276 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 LRFN3Q9BTN0 628 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 ASCL3Q9NQ33 180 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 TNRC6AQ8NDV7 1962 aaKnown RBP11.22□□□□□ -0.61
CASC4-202ENST00000345795 SURF2Q15527 256 aaPredicted RBP11.22□□□□□ -0.61
CASC4-202ENST00000345795 Q6ZRM9 215 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 PRELID3BQ9Y3B1 194 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 PKD1L2Q7Z442 2459 aa11.22□□□□□ -0.61
CASC4-202ENST00000345795 TMEM108Q6UXF1 575 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 LDLRAD3Q86YD5 345 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 STARD4Q96DR4 205 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 USB1Q9BQ65 265 aaKnown RBP11.21□□□□□ -0.61
CASC4-202ENST00000345795 ZNF107Q9UII5 783 aaPredicted RBP11.21□□□□□ -0.61
CASC4-202ENST00000345795 AUP1Q9Y679 476 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 IGKV3D-15A0A087WSY6 115 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 TRIM77I1YAP6 450 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 CRYABP02511 175 aaKnown RBP11.21□□□□□ -0.61
CASC4-202ENST00000345795 OR4A8P0C604 315 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 CCL3L1P16619 93 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 CD24P25063 80 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 HIST2H3PS2Q5TEC6 136 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 LYPD6Q86Y78 171 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 ZFP57Q9NU63 452 aa11.21□□□□□ -0.61
CASC4-202ENST00000345795 STUMQ69YW2 141 aa11.21□□□□□ -0.62
CASC4-202ENST00000345795 MSI2Q96DH6 328 aaKnown RBP11.21□□□□□ -0.62
CASC4-202ENST00000345795 LINC00470Q9BZP3 86 aa11.21□□□□□ -0.62
CASC4-202ENST00000345795 MMP26Q9NRE1 261 aa11.21□□□□□ -0.62
CASC4-202ENST00000345795 STRAPQ9Y3F4 350 aaKnown RBP11.21□□□□□ -0.62
CASC4-202ENST00000345795 KIAA1549Q9HCM3 1950 aa11.21□□□□□ -0.62
CASC4-202ENST00000345795 TRGV10A0A0A0MS01 117 aa11.2□□□□□ -0.62
CASC4-202ENST00000345795 C1orf196B1AJZ1 125 aa11.2□□□□□ -0.62
CASC4-202ENST00000345795 TM4SF5O14894 197 aa11.2□□□□□ -0.62
CASC4-202ENST00000345795 PLAUP00749 431 aa11.2□□□□□ -0.62
CASC4-202ENST00000345795 SLC25A6P12236 298 aa11.2□□□□□ -0.62
CASC4-202ENST00000345795 RPS2P15880 293 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms