RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 IFNA4P05014 189 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 SERPINE2P07093 398 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 PRB3Q04118 309 aaPredicted RBP10.55□□□□□ -0.72
LIMK1-201ENST00000336180 IL13RA2Q14627 380 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 BPIFCQ8NFQ6 507 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 ARL11Q969Q4 196 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 GALNT14Q96FL9 552 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 SUCNR1Q9BXA5 334 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 NSG2Q9Y328 171 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 TRGV8A0A0C4DH27 118 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 IGLV2-14P01704 120 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 NHLH1Q02575 133 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 TMEM267Q0VDI3 215 aaPredicted RBP10.55□□□□□ -0.72
LIMK1-201ENST00000336180 H1FOOQ8IZA3 346 aaPredicted RBP10.55□□□□□ -0.72
LIMK1-201ENST00000336180 DMBX1Q8NFW5 382 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 ZNRD1Q9P1U0 126 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 YLPM1P49750 1951 aaKnown RBP10.55□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A10PA6NDY2 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A18PA6NE21 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A16PA6NEW6 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A20PA6NIJ5 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A22PA8MWA6 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A12PA8MX19 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 A8MXE2 369 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A5PA8MXJ8 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 H7C1Q1 480 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A15PP0C7V4 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A13PP0C7W8 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A14PP0C7W9 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A24PP0C7X0 464 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 ECI1P42126 302 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 SNRPEP62304 92 aaKnown RBP10.54□□□□□ -0.72
LIMK1-201ENST00000336180 BVESQ8NE79 360 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 C5orf30Q96GV9 206 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 ST8SIA3O43173 380 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 KRASP01116 189 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 SPP1P10451 314 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 LPAR6P43657 344 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 NKX2-1P43699 371 aaPredicted RBP10.54□□□□□ -0.72
LIMK1-201ENST00000336180 KLF3P57682 345 aaPredicted RBP10.54□□□□□ -0.72
LIMK1-201ENST00000336180 RPL30P62888 115 aaKnown RBP10.54□□□□□ -0.72
LIMK1-201ENST00000336180 AQP10Q96PS8 301 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 ABHD14AQ9BUJ0 271 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 BARX1Q9HBU1 254 aaPredicted RBP10.54□□□□□ -0.72
LIMK1-201ENST00000336180 PSG11Q9UQ72 335 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 IGSF23A1L1A6 192 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.54□□□□□ -0.72
LIMK1-201ENST00000336180 F2RP25116 425 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 GRNP28799 593 aaKnown RBP10.54□□□□□ -0.72
LIMK1-201ENST00000336180 PRDX2P32119 198 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 RUNX1Q01196 453 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 ZNF146Q15072 292 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 DRAM1Q8N682 238 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 GCSAMQ8N6F7 178 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 OR4A4PQ8NGN8 299 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 GPR146Q96CH1 333 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 SLC25A32Q9H2D1 315 aa10.54□□□□□ -0.72
LIMK1-201ENST00000336180 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 IGKV1D-17A0A075B6S4 117 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 CHST1O43916 411 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 PET100P0DJ07 73 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 TMEM88Q6PEY1 159 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
LIMK1-201ENST00000336180 TMEM171Q8WVE6 324 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 CACNG5Q9UF02 275 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 TUBD1Q9UJT1 453 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 SESN1Q9Y6P5 492 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 FAM90A27PA6NNH2 459 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 TLE1Q04724 770 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 ZNF616Q08AN1 781 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 TIMM23BQ5SRD1 257 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 ASB13Q8WXK3 278 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 MISP3Q96FF7 219 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 TREM1Q9NP99 234 aa10.53□□□□□ -0.72
LIMK1-201ENST00000336180 TMEM30CPA0ZSE6 113 aa10.52□□□□□ -0.72
LIMK1-201ENST00000336180 G6PCP35575 357 aa10.52□□□□□ -0.72
LIMK1-201ENST00000336180 UCP3P55916 312 aa10.52□□□□□ -0.72
LIMK1-201ENST00000336180 KCNIP1Q9NZI2 227 aa10.52□□□□□ -0.72
LIMK1-201ENST00000336180 ITPR1Q14643 2758 aa10.52□□□□□ -0.72
LIMK1-201ENST00000336180 J3QW42 95 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 GYPAP02724 150 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 CD40P25942 277 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 TAGLN2P37802 199 aaKnown RBP10.52□□□□□ -0.73
LIMK1-201ENST00000336180 TDGF1P3P51864 188 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 CCL13Q99616 98 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 NDRG3Q9UGV2 375 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 WIPI2Q9Y4P8 454 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 DSCAMO60469 2012 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 KITLGP21583 273 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 VAMP2P63027 116 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 BSPH1Q075Z2 132 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 TMEM182Q6ZP80 229 aaPredicted RBP10.52□□□□□ -0.73
LIMK1-201ENST00000336180 VKORC1L1Q8N0U8 176 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 FAM216BQ8N7L0 139 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 OR4D5Q8NGN0 318 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms