RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 KIR2DS4P43632 304 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 LHX2P50458 406 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 FUT6P51993 359 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 KIR2DS1Q14954 304 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 TXN2Q99757 166 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 PPIAL4AQ9Y536 164 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 EXPH5Q8NEV8 1989 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 LOC102725191A0A1B0GVB3 256 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 CEACAM8P31997 349 aaPredicted RBP20.7■□□□□ 0.9
SOX1-201ENST00000330949 IZUMO4Q1ZYL8 232 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 SPATA45Q537H7 98 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 SPANXN5Q5MJ07 72 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 BAGE3Q86Y29 109 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 BAGE2Q86Y30 109 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 C1orf174Q8IYL3 243 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 OR2D3Q8NGH3 330 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 OR1L3Q8NH93 324 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 NABP1Q96AH0 204 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 HNRNPA3P51991 378 aaKnown RBP20.7■□□□□ 0.9
SOX1-201ENST00000330949 TMEM42Q69YG0 159 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 RBM24Q9BX46 236 aaKnown RBP20.7■□□□□ 0.9
SOX1-201ENST00000330949 ZNF586Q9NXT0 402 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 KLRF1Q9NZS2 232 aa20.7■□□□□ 0.9
SOX1-201ENST00000330949 AQP7P3A6NL99 342 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 PDE6DO43924 150 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 CBR3O75828 277 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 PSG2P11465 335 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 NPPCP23582 126 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 SIGLECL1Q8N7X8 197 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 OR51H1Q8NH63 302 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 KCNE4Q8WWG9 221 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 SFRP2Q96HF1 295 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 FOXL2NBQ6ZUU3 175 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 ZNF738Q8NE65 137 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 OR1L6Q8NGR2 347 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 MRGPRDQ8TDS7 321 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 OR5P3Q8WZ94 311 aa20.69■□□□□ 0.9
SOX1-201ENST00000330949 ALKBH3Q96Q83 286 aaPredicted RBP20.69■□□□□ 0.9
SOX1-201ENST00000330949 DIRC3C9JPN6 131 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FASLGP48023 281 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 Q6ZN92 141 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 MYPOPQ86VE0 399 aaPredicted RBP20.68■□□□□ 0.9
SOX1-201ENST00000330949 NAPSAO96009 420 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FBLP22087 321 aaKnown RBP20.68■□□□□ 0.9
SOX1-201ENST00000330949 CD38P28907 300 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 ZNF468Q5VIY5 522 aaPredicted RBP20.68■□□□□ 0.9
SOX1-201ENST00000330949 ZNF703Q9H7S9 590 aaPredicted RBP20.68■□□□□ 0.9
SOX1-201ENST00000330949 MDFIC2A0A1B0GVS7 189 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A10PA6NDY2 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A18PA6NE21 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A16PA6NEW6 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A20PA6NIJ5 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A8PA6NJQ4 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A7PA6NKC0 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A22PA8MWA6 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A12PA8MX19 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A5PA8MXJ8 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A23PA8MXZ1 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A15PP0C7V4 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A13PP0C7W8 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A14PP0C7W9 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 FAM90A24PP0C7X0 464 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 COX5AP20674 150 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 LYG1Q8N1E2 194 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 TSTD1Q8NFU3 115 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 ARHGAP21Q5T5U3 1957 aa20.68■□□□□ 0.9
SOX1-201ENST00000330949 CCR5P51681 352 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 STRADBQ9C0K7 418 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 FER1L5A0AVI2 2057 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 C1QTNF9P0C862 333 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 IGLC2P0DOY2 106 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 IGLC3P0DOY3 106 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 KRTDAPP60985 99 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 DAZAP2Q15038 168 aaPredicted RBP20.67■□□□□ 0.9
SOX1-201ENST00000330949 FFAR4Q5NUL3 377 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 STARD4Q96DR4 205 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 TUBG2Q9NRH3 451 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 COX11Q9Y6N1 276 aa20.67■□□□□ 0.9
SOX1-201ENST00000330949 F6UZH7 168 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 NXPH2O95156 264 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 KITLGP21583 273 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 Q0VG73 95 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 FBXL7Q9UJT9 491 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 TRAV9-1A0A075B6T8 112 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 HYPMO75409 117 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 CRYGSP22914 178 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 PRSS12P56730 875 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 OR8G2PQ6IF36 304 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 GMPPAQ96IJ6 420 aaPredicted RBP20.66■□□□□ 0.9
SOX1-201ENST00000330949 MRPL18Q9H0U6 180 aaKnown RBP20.66■□□□□ 0.9
SOX1-201ENST00000330949 CHODLQ9H9P2 273 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 SDK2Q58EX2 2172 aa20.66■□□□□ 0.9
SOX1-201ENST00000330949 PHYHD1Q5SRE7 291 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 RHBDD2Q6NTF9 364 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 CHRNA10Q9GZZ6 450 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 ATP23Q9Y6H3 246 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 C10orf142B7Z368 130 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 DHHO43323 396 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 CBLN1P23435 193 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 SMIM15Q7Z3B0 74 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms