RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SIGLEC5O15389 551 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 ST8SIA5O15466 376 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 TPT1P13693 172 aaKnown RBP14.06□□□□□ -0.16
DDX41-201ENST00000330503 UTF1Q5T230 341 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 PDZD9Q8IXQ8 264 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 LSM10Q969L4 123 aaKnown RBP14.06□□□□□ -0.16
DDX41-201ENST00000330503 MAGT1Q9H0U3 335 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 FAM234AQ9H0X4 552 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 CALYQ9NYX4 217 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 FBXL17Q9UF56 701 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 NBASA2RRP1 2371 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 A0A1B0GU03 582 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 MED19A0JLT2 244 aaPredicted RBP14.05□□□□□ -0.16
DDX41-201ENST00000330503 RNF212BA8MTL3 300 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 KIAA1324LA8MWY0 1029 aaPredicted RBP14.05□□□□□ -0.16
DDX41-201ENST00000330503 LGALS8O00214 317 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 GPR137BO60478 399 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 SLC25A6P12236 298 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 LOXP28300 417 aaPredicted RBP14.05□□□□□ -0.16
DDX41-201ENST00000330503 GPR157Q5UAW9 335 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 THOC7Q6I9Y2 204 aaKnown RBP14.05□□□□□ -0.16
DDX41-201ENST00000330503 TCF23Q7RTU1 214 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 CA5BP1Q8WTZ4 195 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 KCNJ16Q9NPI9 418 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 MED9Q9NWA0 146 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 SDHAF2Q9NX18 166 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 CISD1Q9NZ45 108 aaKnown RBP14.05□□□□□ -0.16
DDX41-201ENST00000330503 JPT1Q9UK76 154 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 RNF115Q9Y4L5 304 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 KALRNO60229 2985 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 DSCAML1Q8TD84 2053 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 B9A039 149 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 YPEL1O60688 119 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 PROP1O75360 226 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 OMGP23515 440 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 LPAR6P43657 344 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 BTNL3Q6UXE8 466 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 YPEL2Q96QA6 119 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 WFDC1Q9HC57 220 aa14.05□□□□□ -0.16
DDX41-201ENST00000330503 RELNP78509 3460 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 COL6A6A6NMZ7 2263 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 TNFRSF13BO14836 293 aaPredicted RBP14.04□□□□□ -0.16
DDX41-201ENST00000330503 RAMP3O60896 148 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 EPHA1P21709 976 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 ZNF134P52741 427 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 LINC00205P59089 165 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 TFF3Q07654 80 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 SWI5Q1ZZU3 235 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 SMIM3Q9BZL3 60 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 MS4A5Q9H3V2 200 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 DYNLRB1Q9NP97 96 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 TMEM106BQ9NUM4 274 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 GNG12Q9UBI6 72 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 PKDREJQ9NTG1 2253 aa14.04□□□□□ -0.16
DDX41-201ENST00000330503 TRAV38-1A0A0B4J264 116 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 PIGBOS1A0A0B4J2F0 54 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 C17orf98A8MV24 154 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 FCN3O75636 299 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 TMEM50AO95807 157 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 NHLH2Q02577 135 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 CCL17Q92583 94 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 ARFGEF3Q5TH69 2177 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 PPIAL4EA0A075B759 164 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 KBTBD11-OT1A0A1B0GTJ5 212 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 FAM24AA6NFZ4 105 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 PPIAL4DF5H284 164 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 NXPH3O95157 252 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 PPIAL4FP0DN26 164 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 AANATQ16613 207 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 EDARADDQ8WWZ3 215 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 CORO2AQ92828 525 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 BARX1Q9HBU1 254 aaPredicted RBP14.03□□□□□ -0.16
DDX41-201ENST00000330503 CLN8Q9UBY8 286 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 PPIAL4AQ9Y536 164 aa14.03□□□□□ -0.16
DDX41-201ENST00000330503 MFSD2BA6NFX1 497 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 LINC00473A8K010 186 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 CHST1O43916 411 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 SSSCA1O60232 199 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 CLDN14O95500 239 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 CLDN1O95832 211 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 IGHV3-7P01780 117 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 PAX9P55771 341 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 Q3ZCU0 254 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 ZNF672Q499Z4 452 aaPredicted RBP14.02□□□□□ -0.16
DDX41-201ENST00000330503 OR2B11Q5JQS5 317 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 ODF3L1Q8IXM7 274 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 C1orf87Q8N0U7 546 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 TMED6Q8WW62 240 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 LRRC46Q96FV0 321 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 LINC00574Q9H8X3 128 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 CACNG5Q9UF02 275 aa14.02□□□□□ -0.16
DDX41-201ENST00000330503 TEX46H3BTG2 121 aa14.02□□□□□ -0.17
DDX41-201ENST00000330503 TMPRSS2O15393 492 aa14.02□□□□□ -0.17
DDX41-201ENST00000330503 FGF16O43320 207 aa14.02□□□□□ -0.17
DDX41-201ENST00000330503 GAPDHP04406 335 aaKnown RBP14.02□□□□□ -0.17
DDX41-201ENST00000330503 FAM157CP0CG43 387 aa14.02□□□□□ -0.17
DDX41-201ENST00000330503 ZNF66Q6ZN08 573 aa14.02□□□□□ -0.17
DDX41-201ENST00000330503 OR2C3Q8N628 320 aa14.02□□□□□ -0.17
DDX41-201ENST00000330503 TMEM204Q9BSN7 226 aa14.02□□□□□ -0.17
DDX41-201ENST00000330503 GFOD1Q9NXC2 390 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms