RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 VSTM5A8MXK1 200 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 B8ZZF3 427 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 IGHV3-7P01780 117 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 ZP3P21754 424 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 LPAR6P43657 344 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 LY6DQ14210 128 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 FGFRL1Q8N441 504 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 KDF1Q8NAX2 398 aaPredicted RBP13.18□□□□□ -0.3
PGBD2-201ENST00000329291 NINJ1Q92982 152 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 LIN7CQ9NUP9 197 aaKnown RBP13.18□□□□□ -0.3
PGBD2-201ENST00000329291 LPAR3Q9UBY5 353 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 PSG11Q9UQ72 335 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 SPINT2O43291 252 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 PROP1O75360 226 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 EDDM3BP56851 147 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 SRSF3P84103 164 aaKnown RBP13.18□□□□□ -0.3
PGBD2-201ENST00000329291 CR1LQ2VPA4 569 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 TMEM252Q8N6L7 170 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 MARC2Q969Z3 335 aa13.18□□□□□ -0.3
PGBD2-201ENST00000329291 LYRM2Q9NU23 88 aaPredicted RBP13.18□□□□□ -0.3
PGBD2-201ENST00000329291 USF3Q68DE3 2245 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 FAM90A27PA6NNH2 459 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 GYPAP02724 150 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 GZMHP20718 246 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 HTD2P86397 168 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 STUMQ69YW2 141 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 BPIFCQ8NFQ6 507 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 Q8TCH9 128 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 LSM10Q969L4 123 aaKnown RBP13.17□□□□□ -0.3
PGBD2-201ENST00000329291 CCL13Q99616 98 aa13.17□□□□□ -0.3
PGBD2-201ENST00000329291 DIDO1Q9BTC0 2240 aaKnown RBP13.16□□□□□ -0.3
PGBD2-201ENST00000329291 TMEM8BA6NDV4 472 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 LINC00473A8K010 186 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 CST7O76096 145 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 CGB3P0DN86 165 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 CGB7P0DN87 165 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 SLC25A6P12236 298 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 ZNF134P52741 427 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 LOXL3P58215 753 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 EIF5AP63241 154 aaKnown RBP13.16□□□□□ -0.3
PGBD2-201ENST00000329291 FBXL19-AS1Q494R0 122 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 DMRTC2Q8IXT2 367 aaPredicted RBP13.16□□□□□ -0.3
PGBD2-201ENST00000329291 RNASE11Q8TAA1 199 aaKnown RBP13.16□□□□□ -0.3
PGBD2-201ENST00000329291 SDSLQ96GA7 329 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 GAFA1Q96PS6 74 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 SH3BGRL3Q9H299 93 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 SESN1Q9Y6P5 492 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 C17orf100A8MU93 164 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 SHISA9B4DS77 424 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 GRNP28799 593 aaKnown RBP13.16□□□□□ -0.3
PGBD2-201ENST00000329291 AKR1C2P52895 323 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 AKR1C1Q04828 323 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 ZNF816Q0VGE8 651 aaPredicted RBP13.16□□□□□ -0.3
PGBD2-201ENST00000329291 CLINT1Q14677 625 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 MORN2Q502X0 79 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 FAM216BQ8N7L0 139 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 RNASE6Q93091 150 aaKnown RBP13.16□□□□□ -0.3
PGBD2-201ENST00000329291 LRRC46Q96FV0 321 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 GINS3Q9BRX5 216 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 MS4A7Q9GZW8 240 aaPredicted RBP13.16□□□□□ -0.3
PGBD2-201ENST00000329291 PKDREJQ9NTG1 2253 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 NDRG3Q9UGV2 375 aa13.16□□□□□ -0.3
PGBD2-201ENST00000329291 E7EQL1 145 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 MED6O75586 246 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 ADH4P08319 380 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 PVALBP20472 110 aaPredicted RBP13.15□□□□□ -0.3
PGBD2-201ENST00000329291 SULT1A2P50226 295 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 VAMP2P63027 116 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 CDSNQ15517 529 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 C17orf58Q2M2W7 97 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 PXDC1Q5TGL8 231 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 PPP1R35Q8TAP8 253 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 PIEZO1Q92508 2521 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 DYSFO75923 2080 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 H3BP45 60 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 WRBO00258 174 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 KRASP01116 189 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 G6PCP35575 357 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 Q3ZCU0 254 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 NCMAPQ5T1S8 102 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 TRAT1Q6PIZ9 186 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 C1orf229Q6ZS94 237 aaPredicted RBP13.15□□□□□ -0.3
PGBD2-201ENST00000329291 ZNF561Q8N587 486 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 TMEM217Q8N7C4 229 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 HSD17B11Q8NBQ5 300 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 LEAP2Q969E1 77 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 C14orf79Q96F83 325 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 HRH4Q9H3N8 390 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 GNG12Q9UBI6 72 aa13.15□□□□□ -0.3
PGBD2-201ENST00000329291 LRBAP50851 2863 aa13.14□□□□□ -0.31
PGBD2-201ENST00000329291 RNF212BA8MTL3 300 aa13.14□□□□□ -0.31
PGBD2-201ENST00000329291 KRBOX1C9JBD0 128 aa13.14□□□□□ -0.31
PGBD2-201ENST00000329291 F2RL2O00254 374 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms