RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ARV1Q9H2C2 271 aa15.27■□□□□ 0.03
CCDC43-201ENST00000315286 LYRM2Q9NU23 88 aaPredicted RBP15.27■□□□□ 0.03
CCDC43-201ENST00000315286 CACNG5Q9UF02 275 aa15.27■□□□□ 0.03
CCDC43-201ENST00000315286 PSG11Q9UQ72 335 aa15.27■□□□□ 0.03
CCDC43-201ENST00000315286 ZNF705EA8MWA4 302 aaPredicted RBP15.26■□□□□ 0.03
CCDC43-201ENST00000315286 ST8SIA5O15466 376 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 RAMP3O60896 148 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 ZP3P21754 424 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 LPAR6P43657 344 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 TMEM252Q8N6L7 170 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 PLPPR2Q96GM1 343 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 NGBQ9NPG2 151 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 LPAR3Q9UBY5 353 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 WRBO00258 174 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 C1QTNF9P0C862 333 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 PAX9P55771 341 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 OR2B11Q5JQS5 317 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 ODF3L1Q8IXM7 274 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 FGFRL1Q8N441 504 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 KDF1Q8NAX2 398 aaPredicted RBP15.26■□□□□ 0.03
CCDC43-201ENST00000315286 DIRC2Q96SL1 478 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 RELNP78509 3460 aa15.26■□□□□ 0.03
CCDC43-201ENST00000315286 BORCS7-ASMTA0A0B4J1R7 106 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 SHISA9B4DS77 424 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 GYPAP02724 150 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 CD55P08174 381 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 IRF2P14316 349 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 MMP9P14780 707 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 OMGP23515 440 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 BRWD1-AS2P59051 145 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 MSMO1Q15800 293 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 TUSC1Q2TAM9 212 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 MST1LQ2TV78 715 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 MORN2Q502X0 79 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 ST6GALNAC3Q8NDV1 305 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 MARC2Q969Z3 335 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 C14orf79Q96F83 325 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 GAFA1Q96PS6 74 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 CCL13Q99616 98 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 GNG12Q9UBI6 72 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 TANC2Q9HCD6 1990 aa15.25■□□□□ 0.03
CCDC43-201ENST00000315286 CCL21O00585 134 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 TNFRSF1AP19438 455 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 SULT1A2P50226 295 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 LOXL3P58215 753 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 LINC00205P59089 165 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 TLE1Q04724 770 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 NCMAPQ5T1S8 102 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 DMRTC2Q8IXT2 367 aaPredicted RBP15.24■□□□□ 0.03
CCDC43-201ENST00000315286 NEUROG1Q92886 237 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 SLC25A31Q9H0C2 315 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 OR6C3Q9NZP0 311 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 JPT1Q9UK76 154 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 C17orf98A8MV24 154 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 KRBOX1C9JBD0 128 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 CLDN1O95832 211 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 CGB3P0DN86 165 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 CGB7P0DN87 165 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 CATR1Q13166 79 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 ZNF788Q6ZQV5 615 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 STPG2Q8N412 459 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 TCTEX1D2Q8WW35 142 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 SMIM8Q96KF7 97 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 GINS3Q9BRX5 216 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 CALYQ9NYX4 217 aa15.24■□□□□ 0.03
CCDC43-201ENST00000315286 FAM90A27PA6NNH2 459 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 VSTM5A8MXK1 200 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 B8ZZF3 427 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 E7EQL1 145 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 F2RL2O00254 374 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 SCO1O75880 301 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 CST7O76096 145 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 MUC1P15941 1255 aaPredicted RBP15.23■□□□□ 0.03
CCDC43-201ENST00000315286 ZNF816Q0VGE8 651 aaPredicted RBP15.23■□□□□ 0.03
CCDC43-201ENST00000315286 Q3ZCU0 254 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 TEX36Q5VZQ5 186 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 ZNF295-AS1Q8N0V1 137 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 SPAG16Q8N0X2 631 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 FAM216BQ8N7L0 139 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 EDARADDQ8WWZ3 215 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 SAT2Q96F10 170 aaPredicted RBP15.23■□□□□ 0.03
CCDC43-201ENST00000315286 NCOR1P1Q9H4R4 102 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 ZNF665Q9H7R5 613 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 LINC00473A8K010 186 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 YPEL1O60688 119 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 MED6O75586 246 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 IGHV3-7P01780 117 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 CLINT1Q14677 625 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 C17orf58Q2M2W7 97 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 YPEL2Q96QA6 119 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 NARFLQ9H6Q4 476 aa15.23■□□□□ 0.03
CCDC43-201ENST00000315286 PROP1O75360 226 aa15.22■□□□□ 0.03
CCDC43-201ENST00000315286 KRASP01116 189 aa15.22■□□□□ 0.03
CCDC43-201ENST00000315286 ZNF134P52741 427 aa15.22■□□□□ 0.03
CCDC43-201ENST00000315286 PXDC1Q5TGL8 231 aa15.22■□□□□ 0.03
CCDC43-201ENST00000315286 ZNF66Q6ZN08 573 aa15.22■□□□□ 0.03
CCDC43-201ENST00000315286 LINC01560Q8TB33 94 aa15.22■□□□□ 0.03
CCDC43-201ENST00000315286 MMP24Q9Y5R2 645 aa15.22■□□□□ 0.03
CCDC43-201ENST00000315286 ARFGEF3Q5TH69 2177 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 LRRC30A6NM36 301 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms