RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 NCOR2Q9Y618 2525 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 ITPR1Q14643 2758 aa5.45□□□□□ -1.54
USP47-201ENST00000305481 A0A1B0GU03 582 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 CHST1O43916 411 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 PROP1O75360 226 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 FBXO24O75426 580 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 SLC25A6P12236 298 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
USP47-201ENST00000305481 SELENOVP59797 346 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 HTD2P86397 168 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 ADAM5Q6NVV9 412 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 ZNF808Q8N4W9 903 aaPredicted RBP5.44□□□□□ -1.54
USP47-201ENST00000305481 Q8TCH9 128 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 LSM10Q969L4 123 aaKnown RBP5.44□□□□□ -1.54
USP47-201ENST00000305481 ABHD14BQ96IU4 210 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 LYRM2Q9NU23 88 aaPredicted RBP5.44□□□□□ -1.54
USP47-201ENST00000305481 TAS2R3Q9NYW6 316 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 RNF7Q9UBF6 113 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 TRGV8A0A0C4DH27 118 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 CGB3P0DN86 165 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 CGB7P0DN87 165 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 LPAR6P43657 344 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 LOXL3P58215 753 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 CCL8P80075 99 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 LTC4SQ16873 150 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 STUMQ69YW2 141 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 BTNL3Q6UXE8 466 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 DMRTC2Q8IXT2 367 aaPredicted RBP5.44□□□□□ -1.54
USP47-201ENST00000305481 TMEM252Q8N6L7 170 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 LRRC20Q8TCA0 184 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 SMIM8Q96KF7 97 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 PLEKHF2Q9H8W4 249 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 LIN7CQ9NUP9 197 aaKnown RBP5.44□□□□□ -1.54
USP47-201ENST00000305481 ZNF705EA8MWA4 302 aaPredicted RBP5.44□□□□□ -1.54
USP47-201ENST00000305481 SIGLEC5O15389 551 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 ST8SIA5O15466 376 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 GZMHP20718 246 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 CAV2P51636 162 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 ZNF134P52741 427 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 SRSF3P84103 164 aaKnown RBP5.44□□□□□ -1.54
USP47-201ENST00000305481 RBPJQ06330 500 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 FGFRL1Q8N441 504 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 DEFB108BQ8NET1 73 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 NEUROG1Q92886 237 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 NINJ1Q92982 152 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 SDSLQ96GA7 329 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 PLPPR2Q96GM1 343 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 GAFA1Q96PS6 74 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 GINS3Q9BRX5 216 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 SH3BGRL3Q9H299 93 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 CACNG5Q9UF02 275 aa5.44□□□□□ -1.54
USP47-201ENST00000305481 DIDO1Q9BTC0 2240 aaKnown RBP5.43□□□□□ -1.54
USP47-201ENST00000305481 DYSFO75923 2080 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 LINC00473A8K010 186 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 C17orf100A8MU93 164 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 C17orf98A8MV24 154 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 SHISA9B4DS77 424 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 SPINT2O43291 252 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 OMGP23515 440 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 SULT1A2P50226 295 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 EIF5AP63241 154 aaKnown RBP5.43□□□□□ -1.54
USP47-201ENST00000305481 MORN2Q502X0 79 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 OR2B11Q5JQS5 317 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 FAM122CQ6P4D5 195 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 TCF23Q7RTU1 214 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 ZBTB34Q8NCN2 500 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 BPIFCQ8NFQ6 507 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 PSG11Q9UQ72 335 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 RFNGQ9Y644 331 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 RAI1Q7Z5J4 1906 aaPredicted RBP5.43□□□□□ -1.54
USP47-201ENST00000305481 PKDREJQ9NTG1 2253 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 RAB19A4D1S5 217 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 B8ZZF3 427 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 KRBOX1C9JBD0 128 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 F2RL2O00254 374 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 CST7O76096 145 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 ADH4P08319 380 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 P0C879 139 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 SPP1P10451 314 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 MMP9P14780 707 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 CA7P43166 264 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 ID4P47928 161 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 EDDM3BP56851 147 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 CDSNQ15517 529 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 ZNF124Q15973 351 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 C17orf58Q2M2W7 97 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 TRAT1Q6PIZ9 186 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 ZNF561Q8N587 486 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 SAT2Q96F10 170 aaPredicted RBP5.43□□□□□ -1.54
USP47-201ENST00000305481 SESN1Q9Y6P5 492 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 NBASA2RRP1 2371 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 DSCAML1Q8TD84 2053 aa5.43□□□□□ -1.54
USP47-201ENST00000305481 E7EQL1 145 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 FCN3O75636 299 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 IGHV3-7P01780 117 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 GYPAP02724 150 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 CD55P08174 381 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 C1QTNF9P0C862 333 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 PVALBP20472 110 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms