RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 AP5S1Q9NUS5 200 aa13.26□□□□□ -0.29
SHROOM4-201ENST00000289292 TRAV17A0A0B4J275 112 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 PATE3B3GLJ2 98 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 ROM1Q03395 351 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 DEFB124Q8NES8 71 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 MRPL18Q9H0U6 180 aaKnown RBP13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 A0A0U1RQV5 110 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 ZIC3O60481 467 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 MELTFP08582 738 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 PRRX1P54821 245 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 METTL1Q9UBP6 276 aaKnown RBP13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 ARID1AO14497 2285 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 A0A0G2JK05 382 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 C1orf100Q5SVJ3 147 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 UBALD2Q8IYN6 164 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 NRXN2Q9P2S2 1712 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 A0A087WV48 116 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 DHRS7CA6NNS2 312 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 J3QR06 171 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 OR2A4O95047 310 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 MIC13Q5XKP0 118 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 POC1AQ8NBT0 407 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 FAM222BQ8WU58 562 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 OR2A7Q96R45 310 aa13.25□□□□□ -0.29
SHROOM4-201ENST00000289292 GAGE10A6NGK3 116 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 CORTO00230 105 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 OR2H2O95918 312 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 MFAP2P55001 183 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 PCED1AQ9H1Q7 454 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 HBZP02008 142 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 ZNF818PQ6ZRF7 136 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 ZNF826PQ6ZT77 177 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 HES7Q9BYE0 225 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 DNASE2O00115 360 aaPredicted RBP13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 ISLRO14498 428 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 MGPP08493 103 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 CD82P27701 267 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 SRSF3P84103 164 aaKnown RBP13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 RIGQ13278 110 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 KIAA1644Q3SXP7 199 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 TUBD1Q9UJT1 453 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 K7ERU9 68 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 CLDN14O95500 239 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 SLC25A47Q6Q0C1 308 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 ZNF841Q6ZN19 808 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 MKRN2OSH3BPM6 223 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 DANCRP0C864 163 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 EGR1P18146 543 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 TAS2R60P59551 318 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 CEACAM21Q3KPI0 293 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 ZNF788Q6ZQV5 615 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 LINC00596Q86U02 117 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 NR2C2APQ86WQ0 139 aa13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 EAF1Q96JC9 268 aaPredicted RBP13.24□□□□□ -0.29
SHROOM4-201ENST00000289292 IL9P15248 144 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 FGF12P61328 243 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 TMEM187Q14656 261 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 RASL11BQ9BPW5 248 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 PAXXQ9BUH6 204 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 MRPL37Q9BZE1 423 aaKnown RBP13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 NPBWR2P48146 333 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 MEF2BQ02080 365 aaPredicted RBP13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 PERPQ96FX8 193 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 ADTRPQ96IZ2 230 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 PARP14Q460N5 1801 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 BTCP35070 178 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 EGR4Q05215 589 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 CARFQ8N187 725 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 TAF15Q92804 592 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 ZDHHC8Q9ULC8 765 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 ANKRD36A6QL64 1941 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 TMEM108Q6UXF1 575 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 PQLC2Q6ZP29 291 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 RALYQ9UKM9 306 aaKnown RBP13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 SPAG17Q6Q759 2223 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 KRTCAP3Q53RY4 240 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 PET117Q6UWS5 81 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 OR1L1Q8NH94 360 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 ZNF71Q9NQZ8 489 aaPredicted RBP13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 FOXJ2Q9P0K8 574 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 CLEC1BQ9P126 229 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 PRNDQ9UKY0 176 aa13.23□□□□□ -0.29
SHROOM4-201ENST00000289292 DMRTA1Q5VZB9 504 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 GBGT1Q8N5D6 347 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 ZNF645Q8N7E2 425 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 SMDT1Q9H4I9 107 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 ARL14EPLP0DKL9 152 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 ZNF708P17019 499 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 SERF2P84101 59 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 FAM27BQ5VT28 67 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 WDR31Q8NA23 367 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 CISD1Q9NZ45 108 aaKnown RBP13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 GNG7O60262 68 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 ZG16O60844 167 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 FOXC1Q12948 553 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 SRSF9Q13242 221 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 VKORC1L1Q8N0U8 176 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 ARL6IP6Q8N6S5 226 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms