RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SLC25A5P05141 298 aaKnown RBP10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 SNRPCP09234 159 aaKnown RBP10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 MAGEA5P43359 124 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 PSG4Q00888 419 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 EIF4E3Q8N5X7 224 aaKnown RBP10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 SLC7A10Q9NS82 523 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 CHRNB4P30926 498 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 LY6G6FQ5SQ64 297 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 EDARADDQ8WWZ3 215 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 RAB37Q96AX2 223 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 ANGPTL4Q9BY76 406 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 OR2H1Q9GZK4 316 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 SMDT1Q9H4I9 107 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 TMEM38BQ9NVV0 291 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 HS3ST3B1Q9Y662 390 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 ZNF407Q9C0G0 2248 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 LYZL6O75951 148 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 CDS2O95674 445 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 CD74P04233 296 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 TMEM50BP56557 158 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 CT55Q8WUE5 264 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 MRGPRFQ96AM1 343 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 UQCR10Q9UDW1 63 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 CACFD1Q9UGQ2 172 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 A6NDN8 102 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 HOXA6P31267 233 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 VAX1Q5SQQ9 334 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 MUC15Q8N387 334 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 RBM14Q96PK6 669 aaKnown RBP10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 HES4Q9HCC6 221 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 SLC45A2Q9UMX9 530 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 MFAP2P55001 183 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 OR4P4Q8NGL7 312 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 GPR35Q9HC97 309 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 MANBALQ9NQG1 85 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 NGFP01138 241 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 F2RP25116 425 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 ARR3P36575 388 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 PSG5Q15238 335 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 SSX8Q7RTT4 187 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 PSG11Q9UQ72 335 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 IGHV3-43A0A0B4J1X8 118 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 RNF222A6NCQ9 220 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 SLC22A20A6NK97 555 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 NDUFB4O95168 129 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 FCGR3AP08637 254 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 IGHV3-43DP0DP04 118 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 ZNF137PP52743 207 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 PAFAH1B2P68402 229 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 AESQ08117 197 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 TAAR6Q96RI8 345 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 ABHD14AQ9BUJ0 271 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 SH3BGRL3Q9H299 93 aa10.85□□□□□ -0.67
SLC6A1-201ENST00000287766 ACACAQ13085 2346 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 OR5B21A6NL26 309 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 NPIPB7O75200 414 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 HIKESHIQ53FT3 197 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 H1FOOQ8IZA3 346 aaPredicted RBP10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 OR2M7Q8NG81 312 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 ADAMTS17Q8TE56 1095 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 MAP1LC3CQ9BXW4 147 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 BRCA2P51587 3418 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 A0A1B0GTI1 187 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 GNG3P63215 75 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 MEF2BQ02080 365 aaPredicted RBP10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 PAQR4Q8N4S7 273 aaPredicted RBP10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 OR8A1Q8NGG7 326 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 SRXN1Q9BYN0 137 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 PLXNA2O75051 1894 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 LAMA2P24043 3122 aaKnown RBP10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 ADH4P08319 380 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 IZUMO4Q1ZYL8 232 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 FAM27BQ5VT28 67 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 TMEM178AQ8NBL3 297 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 OR4B1Q8NGF8 309 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 PRDM6Q9NQX0 595 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 STARD10Q9Y365 291 aa10.84□□□□□ -0.67
SLC6A1-201ENST00000287766 LNP1A1A4G5 178 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 ISLRO14498 428 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 EFNA2O43921 213 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 HKR1P10072 659 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 ERASQ7Z444 233 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 OR10S1Q8NGN2 331 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 HSD17B10Q99714 261 aaKnown RBP10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 HES7Q9BYE0 225 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 KLF13Q9Y2Y9 288 aaPredicted RBP10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 WIPI2Q9Y4P8 454 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 HELTA6NFD8 242 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 HSPB1P04792 205 aaKnown RBP10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 IGFBP3P17936 291 aaPredicted RBP10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 RPL7P18124 248 aaKnown RBP10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 MPLP40238 635 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 NPBWR2P48146 333 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 UBE2L3P68036 154 aaKnown RBP10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 CXorf66Q5JRM2 361 aaPredicted RBP10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 CLDN16Q9Y5I7 305 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 CTXND1A0A1B0GTU2 59 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 C5orf63A6NC05 138 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms