RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 GFRA1P56159 465 aa8.83□□□□□ -1
SKA1-201ENST00000285116 ERVS71-1P61550 626 aa8.83□□□□□ -1
SKA1-201ENST00000285116 HLA-BQ31612 363 aa8.83□□□□□ -1
SKA1-201ENST00000285116 BSXQ3C1V8 233 aa8.83□□□□□ -1
SKA1-201ENST00000285116 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
SKA1-201ENST00000285116 OR10D3Q8NH80 312 aa8.83□□□□□ -1
SKA1-201ENST00000285116 SCGB1C1Q8TD33 95 aa8.83□□□□□ -1
SKA1-201ENST00000285116 ZNF845Q96IR2 970 aaPredicted RBP8.83□□□□□ -1
SKA1-201ENST00000285116 ALKBH3Q96Q83 286 aaPredicted RBP8.83□□□□□ -1
SKA1-201ENST00000285116 FGF23Q9GZV9 251 aaPredicted RBP8.83□□□□□ -1
SKA1-201ENST00000285116 FKBP11Q9NYL4 201 aa8.83□□□□□ -1
SKA1-201ENST00000285116 ZNF318Q5VUA4 2279 aa8.83□□□□□ -1
SKA1-201ENST00000285116 PGLYRP1O75594 196 aaPredicted RBP8.83□□□□□ -1
SKA1-201ENST00000285116 GZMHP20718 246 aa8.83□□□□□ -1
SKA1-201ENST00000285116 F2RP25116 425 aa8.83□□□□□ -1
SKA1-201ENST00000285116 S100GP29377 79 aa8.83□□□□□ -1
SKA1-201ENST00000285116 PCSK4Q6UW60 755 aa8.83□□□□□ -1
SKA1-201ENST00000285116 ZNF295-AS1Q8N0V1 137 aa8.83□□□□□ -1
SKA1-201ENST00000285116 CPEB3Q8NE35 698 aaKnown RBP8.83□□□□□ -1
SKA1-201ENST00000285116 OR5A2Q8NGI9 324 aa8.83□□□□□ -1
SKA1-201ENST00000285116 IFI44Q8TCB0 444 aa8.83□□□□□ -1
SKA1-201ENST00000285116 PCNX1Q96RV3 2341 aa8.83□□□□□ -1
SKA1-201ENST00000285116 SHANK1Q9Y566 2161 aa8.82□□□□□ -1
SKA1-201ENST00000285116 IGKV1D-13A0A0B4J2D9 117 aa8.82□□□□□ -1
SKA1-201ENST00000285116 IGKV1-6A0A0C4DH72 117 aa8.82□□□□□ -1
SKA1-201ENST00000285116 CXCL13O43927 109 aa8.82□□□□□ -1
SKA1-201ENST00000285116 SOX15O60248 233 aa8.82□□□□□ -1
SKA1-201ENST00000285116 HRASP01112 189 aa8.82□□□□□ -1
SKA1-201ENST00000285116 IGKV1-13P0DP09 117 aa8.82□□□□□ -1
SKA1-201ENST00000285116 FOLR3P41439 243 aa8.82□□□□□ -1
SKA1-201ENST00000285116 PRDX4Q13162 271 aa8.82□□□□□ -1
SKA1-201ENST00000285116 ZNF726P1Q15940 193 aa8.82□□□□□ -1
SKA1-201ENST00000285116 ZNF324BQ6AW86 544 aaPredicted RBP8.82□□□□□ -1
SKA1-201ENST00000285116 ZNF573Q86YE8 665 aa8.82□□□□□ -1
SKA1-201ENST00000285116 ZDHHC23Q8IYP9 409 aa8.82□□□□□ -1
SKA1-201ENST00000285116 GBGT1Q8N5D6 347 aa8.82□□□□□ -1
SKA1-201ENST00000285116 NECAP1Q8NC96 275 aa8.82□□□□□ -1
SKA1-201ENST00000285116 TMEM37Q8WXS4 190 aa8.82□□□□□ -1
SKA1-201ENST00000285116 STRADBQ9C0K7 418 aa8.82□□□□□ -1
SKA1-201ENST00000285116 PILRBQ9UKJ0 227 aa8.82□□□□□ -1
SKA1-201ENST00000285116 TMEM265A0A087WTH1 108 aa8.82□□□□□ -1
SKA1-201ENST00000285116 KBTBD11O94819 623 aa8.82□□□□□ -1
SKA1-201ENST00000285116 SCGB1D1O95968 90 aa8.82□□□□□ -1
SKA1-201ENST00000285116 HLA-HP01893 362 aa8.82□□□□□ -1
SKA1-201ENST00000285116 OR10J1P30954 320 aa8.82□□□□□ -1
SKA1-201ENST00000285116 OR3A1P47881 315 aa8.82□□□□□ -1
SKA1-201ENST00000285116 SPIN3Q5JUX0 258 aa8.82□□□□□ -1
SKA1-201ENST00000285116 ZNF468Q5VIY5 522 aaPredicted RBP8.82□□□□□ -1
SKA1-201ENST00000285116 PEAR1Q5VY43 1037 aaPredicted RBP8.82□□□□□ -1
SKA1-201ENST00000285116 CISD2Q8N5K1 135 aaKnown RBP8.82□□□□□ -1
SKA1-201ENST00000285116 MRPL30Q8TCC3 161 aaKnown RBP8.82□□□□□ -1
SKA1-201ENST00000285116 APOBEC3DQ96AK3 386 aaPredicted RBP8.82□□□□□ -1
SKA1-201ENST00000285116 PCGF1Q9BSM1 259 aa8.82□□□□□ -1
SKA1-201ENST00000285116 FUT9Q9Y231 359 aa8.82□□□□□ -1
SKA1-201ENST00000285116 DEGS1O15121 323 aa8.81□□□□□ -1
SKA1-201ENST00000285116 TYMSP04818 313 aa8.81□□□□□ -1
SKA1-201ENST00000285116 SCTP09683 121 aa8.81□□□□□ -1
SKA1-201ENST00000285116 FGF8P55075 233 aaPredicted RBP8.81□□□□□ -1
SKA1-201ENST00000285116 SERF2P84101 59 aa8.81□□□□□ -1
SKA1-201ENST00000285116 OR10J5Q8NHC4 309 aa8.81□□□□□ -1
SKA1-201ENST00000285116 ANAPC16Q96DE5 110 aa8.81□□□□□ -1
SKA1-201ENST00000285116 RSG1Q9BU20 258 aa8.81□□□□□ -1
SKA1-201ENST00000285116 RBKSQ9H477 322 aa8.81□□□□□ -1
SKA1-201ENST00000285116 OR6C3Q9NZP0 311 aa8.81□□□□□ -1
SKA1-201ENST00000285116 POLR3KQ9Y2Y1 108 aaPredicted RBP8.81□□□□□ -1
SKA1-201ENST00000285116 OR2W1Q9Y3N9 320 aa8.81□□□□□ -1
SKA1-201ENST00000285116 DNAJC13O75165 2243 aa8.81□□□□□ -1
SKA1-201ENST00000285116 A0A0G2JMM0 328 aa8.81□□□□□ -1
SKA1-201ENST00000285116 A0A1W2PPB8 328 aa8.81□□□□□ -1
SKA1-201ENST00000285116 A0A1W2PRS3 328 aa8.81□□□□□ -1
SKA1-201ENST00000285116 KIR3DP1A8MWS1 328 aa8.81□□□□□ -1
SKA1-201ENST00000285116 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.81□□□□□ -1
SKA1-201ENST00000285116 PATE4P0C8F1 98 aa8.81□□□□□ -1
SKA1-201ENST00000285116 PCP4P48539 62 aa8.81□□□□□ -1
SKA1-201ENST00000285116 ELLP55199 621 aaPredicted RBP8.81□□□□□ -1
SKA1-201ENST00000285116 RPL23P62829 140 aaKnown RBP8.81□□□□□ -1
SKA1-201ENST00000285116 MOB1BQ7L9L4 216 aa8.81□□□□□ -1
SKA1-201ENST00000285116 YRDCQ86U90 279 aaKnown RBP8.81□□□□□ -1
SKA1-201ENST00000285116 OR56B2PQ8NGI1 322 aa8.81□□□□□ -1
SKA1-201ENST00000285116 PINX1Q96BK5 328 aaKnown RBP8.81□□□□□ -1
SKA1-201ENST00000285116 THOC3Q96J01 351 aaKnown RBP8.81□□□□□ -1
SKA1-201ENST00000285116 PKIBQ9C010 78 aa8.81□□□□□ -1
SKA1-201ENST00000285116 OR51I2Q9H344 312 aa8.81□□□□□ -1
SKA1-201ENST00000285116 VSIRQ9H7M9 311 aa8.81□□□□□ -1
SKA1-201ENST00000285116 MTCH1Q9NZJ7 389 aa8.81□□□□□ -1
SKA1-201ENST00000285116 IL17BQ9UHF5 180 aa8.81□□□□□ -1
SKA1-201ENST00000285116 NAGKQ9UJ70 344 aa8.81□□□□□ -1
SKA1-201ENST00000285116 A0A1W2PPQ1 181 aa8.81□□□□□ -1
SKA1-201ENST00000285116 G3V3Y1 287 aa8.81□□□□□ -1
SKA1-201ENST00000285116 SLC33A1O00400 549 aaPredicted RBP8.81□□□□□ -1
SKA1-201ENST00000285116 ZNF737O75373 536 aa8.81□□□□□ -1
SKA1-201ENST00000285116 MDH2P40926 338 aaKnown RBP8.81□□□□□ -1
SKA1-201ENST00000285116 CNN1P51911 297 aaKnown RBP8.81□□□□□ -1
SKA1-201ENST00000285116 C21orf62-AS1Q17RA5 79 aa8.81□□□□□ -1
SKA1-201ENST00000285116 PMS2CLQ68D20 193 aa8.81□□□□□ -1
SKA1-201ENST00000285116 BTNL3Q6UXE8 466 aa8.81□□□□□ -1
SKA1-201ENST00000285116 ARL6IP6Q8N6S5 226 aa8.81□□□□□ -1
SKA1-201ENST00000285116 OR2T10Q8NGZ9 312 aa8.81□□□□□ -1
SKA1-201ENST00000285116 CCL28Q9NRJ3 127 aa8.81□□□□□ -1
SKA1-201ENST00000285116 ACACBO00763 2458 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms