RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CLEC18CQ8NCF0 446 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 TMEM56Q96MV1 263 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 PARLQ9H300 379 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 PRSS50Q9UI38 385 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 TRAPPC2LQ9UL33 140 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 TMEM56-RWDD3S4R434 201 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 TRAV24A0A0B4J272 114 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 OR6C6A6NF89 314 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 ZNF716A6NP11 495 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 CYB5R3P00387 301 aaPredicted RBP11.01□□□□□ -0.65
SNX1-201ENST00000261889 COX6A1P12074 109 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 PKIAP61925 76 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 ZNF826PQ6ZT77 177 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 GGNQ86UU5 652 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 VKORC1L1Q8N0U8 176 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 NOSIPQ9Y314 301 aaKnown RBP11.01□□□□□ -0.65
SNX1-201ENST00000261889 PPP5D1E7EU14 171 aa11□□□□□ -0.65
SNX1-201ENST00000261889 MRPL33O75394 65 aaKnown RBP11□□□□□ -0.65
SNX1-201ENST00000261889 C1QTNF9P0C862 333 aa11□□□□□ -0.65
SNX1-201ENST00000261889 PRB4P10163 310 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 UCP1P25874 307 aa11□□□□□ -0.65
SNX1-201ENST00000261889 TMEM211Q6ICI0 200 aa11□□□□□ -0.65
SNX1-201ENST00000261889 WDR74Q6RFH5 385 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 LINC00696Q6ZRV3 163 aa11□□□□□ -0.65
SNX1-201ENST00000261889 SLC35E3Q7Z769 313 aa11□□□□□ -0.65
SNX1-201ENST00000261889 ZNF114Q8NC26 417 aa11□□□□□ -0.65
SNX1-201ENST00000261889 MRPL30Q8TCC3 161 aaKnown RBP11□□□□□ -0.65
SNX1-201ENST00000261889 COL25A1Q9BXS0 654 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 IL17BQ9UHF5 180 aa11□□□□□ -0.65
SNX1-201ENST00000261889 IGHV1-45A0A0A0MS14 117 aa11□□□□□ -0.65
SNX1-201ENST00000261889 ZNF705FA8MVS1 300 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 DKK1O94907 266 aa11□□□□□ -0.65
SNX1-201ENST00000261889 ZNF705DP0CH99 300 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 ZNF705BP0CI00 300 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 RAC1P63000 192 aa11□□□□□ -0.65
SNX1-201ENST00000261889 BSXQ3C1V8 233 aa11□□□□□ -0.65
SNX1-201ENST00000261889 FAM185AQ8N0U4 392 aa11□□□□□ -0.65
SNX1-201ENST00000261889 OR1P1Q8NH06 330 aa11□□□□□ -0.65
SNX1-201ENST00000261889 DCTN5Q9BTE1 182 aa11□□□□□ -0.65
SNX1-201ENST00000261889 ETV2O00321 342 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 LAMTOR5O43504 91 aa11□□□□□ -0.65
SNX1-201ENST00000261889 KLF7O75840 302 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 MPLP40238 635 aa11□□□□□ -0.65
SNX1-201ENST00000261889 ATP5G3P48201 142 aa11□□□□□ -0.65
SNX1-201ENST00000261889 EDDM3BP56851 147 aa11□□□□□ -0.65
SNX1-201ENST00000261889 RPL23P62829 140 aaKnown RBP11□□□□□ -0.65
SNX1-201ENST00000261889 HIST1H3AP68431 136 aa11□□□□□ -0.65
SNX1-201ENST00000261889 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
SNX1-201ENST00000261889 Q0VFX4 171 aa11□□□□□ -0.65
SNX1-201ENST00000261889 ZNF124Q15973 351 aa11□□□□□ -0.65
SNX1-201ENST00000261889 MKXQ8IYA7 352 aa11□□□□□ -0.65
SNX1-201ENST00000261889 DDA1Q9BW61 102 aa11□□□□□ -0.65
SNX1-201ENST00000261889 C19orf25Q9UFG5 118 aaPredicted RBP11□□□□□ -0.65
SNX1-201ENST00000261889 DVL1O14640 695 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 WNT9BO14905 357 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 PLXNB1O43157 2135 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 ZG16O60844 167 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 NAPSAO96009 420 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 P04436 131 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 CEACAM6P40199 344 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 LY6G6EA0A0G2JKS1 128 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 CELA3BP08861 270 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
SNX1-201ENST00000261889 U3KQA8 63 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 CDIPTO14735 213 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 ST8SIA5O15466 376 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 Q3ZCU0 254 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 OR1L1Q8NH94 360 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 ABHD14BQ96IU4 210 aa10.99□□□□□ -0.65
SNX1-201ENST00000261889 F2Z2F3 143 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 RAC3P60763 192 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 IL24Q13007 206 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 TMEM241Q24JQ0 296 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 TMEM42Q69YG0 159 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 OR52L2PQ8NGH6 319 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 OR2V1Q8NHB1 315 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 OR2W1Q9Y3N9 320 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 ZNF320A2RRD8 509 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 FGF7P21781 194 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 NPPCP23582 126 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 TFPI2P48307 235 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 RPL30P62888 115 aaKnown RBP10.98□□□□□ -0.65
SNX1-201ENST00000261889 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
SNX1-201ENST00000261889 ZNF585BQ52M93 769 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 MRPL14Q6P1L8 145 aaKnown RBP10.98□□□□□ -0.65
SNX1-201ENST00000261889 M1APQ8TC57 530 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 FAM103A1Q9BTL3 118 aaKnown RBP10.98□□□□□ -0.65
SNX1-201ENST00000261889 CACNA1BQ00975 2339 aa10.98□□□□□ -0.65
SNX1-201ENST00000261889 IGLV3-32A0A0A0MS00 114 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 IGLV2-14P01704 120 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 HBE1P02100 147 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 CST2P09228 141 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 GCH1P30793 250 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 B3GALT5-AS1P59052 145 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 LOXL4Q96JB6 756 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 OR5B12Q96R08 314 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 SNHG12Q9BXW3 62 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 DLL3Q9NYJ7 618 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms