RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PPP1CAP62136 330 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 SPANXN1Q5VSR9 72 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 SLC36A1Q7Z2H8 476 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 BIVMQ86UB2 503 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 SPSB2Q99619 263 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 CFHR5Q9BXR6 569 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF257Q9Y2Q1 563 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 CCL27Q9Y4X3 112 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 TRIP11Q15643 1979 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 MRPS11P82912 194 aaKnown RBP11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 HOXA4Q00056 320 aaPredicted RBP11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 FAM216AQ8WUB2 273 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 PSMG3Q9BT73 122 aaPredicted RBP11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 TMEM106BQ9NUM4 274 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 WNK3Q9BYP7 1800 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 IGHV3-43A0A0B4J1X8 118 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 LDLRAD4O15165 306 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 IGHV3-43DP0DP04 118 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 FSTP19883 344 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZP1P60852 638 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 LSM6P62312 80 aaKnown RBP11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 IZUMO4Q1ZYL8 232 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 TCF24Q7RTU0 167 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 OR2K2Q8NGT1 345 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 SPSB4Q96A44 273 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 MRPS18BQ9Y676 258 aaKnown RBP11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 CD160O95971 181 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 GABRG2P18507 467 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 WNT5AP41221 380 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 NANOS3P60323 173 aaKnown RBP11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 Q8WTZ3 238 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 CLN8Q9UBY8 286 aa11.46□□□□□ -0.58
PCDHGA3-201ENST00000253812 SH2D7A6NKC9 451 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 GOSR1O95249 250 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 CA7P43166 264 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 ZNF414Q96IQ9 312 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 SMIM8Q96KF7 97 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 DSCR4P56555 118 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 ROM1Q03395 351 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 GGTLC2Q14390 218 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 GAB4Q2WGN9 574 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 SPRED2Q7Z698 418 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 SH3BGRL3Q9H299 93 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 MYOZ1Q9NP98 299 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 SF3B6Q9Y3B4 125 aaKnown RBP11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 MARCH11A6NNE9 402 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 H0Y980 276 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 ASAH2BP0C7U1 165 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 RBM11P57052 281 aaKnown RBP11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 LRRC10Q5BKY1 277 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 NUP37Q8NFH4 326 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 OR1N1Q8NGS0 311 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 SMOC1Q9H4F8 434 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 SBF2Q86WG5 1849 aa11.45□□□□□ -0.58
PCDHGA3-201ENST00000253812 NDUFB3O43676 98 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 MT-CO3P00414 261 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 MGPP08493 103 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 SRP19P09132 144 aaKnown RBP11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 GTF3AQ92664 365 aaKnown RBP11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 C7orf71A4D174 169 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 TMEM189A5PLL7 270 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 SNRPCP09234 159 aaKnown RBP11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 TNFRSF1AP19438 455 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 RELQ04864 619 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 CXorf66Q5JRM2 361 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 OR6X1Q8NH79 312 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 COPS9Q8WXC6 57 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 SGK494Q96LW2 274 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 CHST5Q9GZS9 411 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 ELOVL5Q9NYP7 299 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 WNT16Q9UBV4 365 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 DSPPQ9NZW4 1301 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 CXorf51AA0A1B0GTR3 108 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 GDF9O60383 454 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 GPR183P32249 361 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 PRICKLE4Q2TBC4 344 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 RHBDD2Q6NTF9 364 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 PRNTQ86SH4 94 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 UBALD2Q8IYN6 164 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 OR2I1PQ8NGU4 316 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 SPAG8Q99932 426 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 RPL36A-HNRNPH2H7BZ11 118 aa11.44□□□□□ -0.58
PCDHGA3-201ENST00000253812 LINC01387J3KSC0 135 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms