RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SFT2D2O95562 160 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 TPRX1Q8N7U7 411 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 ASB5Q8WWX0 329 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 RASL10BQ96S79 203 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 CCL13Q99616 98 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 A0A0B4J2E0 115 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 A0A1B0GX12 115 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 RBFOX2O43251 390 aaKnown RBP eCLIP11.56□□□□□ -0.56
NEK9-201ENST00000238616 ACAA1P09110 424 aaPredicted RBP11.56□□□□□ -0.56
NEK9-201ENST00000238616 COPS9Q8WXC6 57 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 PRSS27Q9BQR3 290 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 MBD1Q9UIS9 605 aaPredicted RBP11.56□□□□□ -0.56
NEK9-201ENST00000238616 DAOP14920 347 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 ZFP36L2P47974 494 aaKnown RBP11.56□□□□□ -0.56
NEK9-201ENST00000238616 SNRPD3P62318 126 aaKnown RBP11.56□□□□□ -0.56
NEK9-201ENST00000238616 MBNL2Q5VZF2 373 aaKnown RBP11.56□□□□□ -0.56
NEK9-201ENST00000238616 CLEC18BQ6UXF7 455 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 CHRNA10Q9GZZ6 450 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 NHSQ6T4R5 1651 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 SBF2Q86WG5 1849 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 FCARP24071 287 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 ZG16BQ96DA0 208 aa11.56□□□□□ -0.56
NEK9-201ENST00000238616 SOCS1O15524 211 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 GP1BAP07359 652 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 OTX1P32242 354 aaPredicted RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 FAM219BQ5XKK7 198 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 RGP1Q92546 391 aaPredicted RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 FRRS1LQ9P0K9 344 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 MRPS16Q9Y3D3 137 aaKnown RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 COTL1Q14019 142 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 Q6ZNX1 250 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 ADAD2Q8NCV1 583 aaKnown RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 BEND2Q8NDZ0 799 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 ANAPC1Q9H1A4 1944 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 DXOO77932 396 aaKnown RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 ZP3P21754 424 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 TP53I13Q8NBR0 393 aaPredicted RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 ZNF707Q96C28 371 aaPredicted RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 C7orf71A4D174 169 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 IGHV3-48P01763 117 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 PPIAL4EA0A075B759 164 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 PPIAL4DF5H284 164 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 PPIAL4FP0DN26 164 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 RAB9AP51151 201 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 SLC25A1P53007 311 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 OPN3Q9H1Y3 402 aaPredicted RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 CISD1Q9NZ45 108 aaKnown RBP11.55□□□□□ -0.56
NEK9-201ENST00000238616 PPIAL4AQ9Y536 164 aa11.55□□□□□ -0.56
NEK9-201ENST00000238616 DSCAML1Q8TD84 2053 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 C9JCJ5 164 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 KLF9Q13886 244 aaPredicted RBP11.54□□□□□ -0.56
NEK9-201ENST00000238616 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 SF3B6Q9Y3B4 125 aaKnown RBP11.54□□□□□ -0.56
NEK9-201ENST00000238616 MPC1Q9Y5U8 109 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 ARRDC5A6NEK1 342 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 ADAP1O75689 374 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 CCL3P10147 92 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 CD99P14209 185 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 CX3CL1P78423 397 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 OR6X1Q8NH79 312 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 DNASE2BQ8WZ79 361 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 IGHV3-35A0A0C4DH35 117 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 PROB1E7EW31 1015 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 KBTBD11O94819 623 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 C1orf185Q5T7R7 199 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 ZNF418Q8TF45 676 aaPredicted RBP11.54□□□□□ -0.56
NEK9-201ENST00000238616 PITPNC1Q9UKF7 332 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 ADAMTS9Q9P2N4 1935 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 MFAP2P55001 183 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 CBLN3Q6UW01 205 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 Q9N2K0 584 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 MBPP02686 304 aaPredicted RBP11.54□□□□□ -0.56
NEK9-201ENST00000238616 CT62P0C5K7 136 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 Q6ZNB5 142 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 CITED2Q99967 270 aaPredicted RBP11.54□□□□□ -0.56
NEK9-201ENST00000238616 YBX2Q9Y2T7 364 aaKnown RBP11.54□□□□□ -0.56
NEK9-201ENST00000238616 RLFQ13129 1914 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 C21orf140B9A014 251 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 UNQ5815/PRO19632Q6UWF5 114 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 C2orf88Q9BSF0 95 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 FGF20Q9NP95 211 aaPredicted RBP11.54□□□□□ -0.56
NEK9-201ENST00000238616 TOMM7Q9P0U1 55 aa11.54□□□□□ -0.56
NEK9-201ENST00000238616 CD74P04233 296 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 CXorf66Q5JRM2 361 aaPredicted RBP11.53□□□□□ -0.56
NEK9-201ENST00000238616 FGF11Q92914 225 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 C11orf68Q9H3H3 251 aaKnown RBP11.53□□□□□ -0.56
NEK9-201ENST00000238616 BCL2L10Q9HD36 194 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 TNFRSF12AQ9NP84 129 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 SIRT7Q9NRC8 400 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 VAX2Q9UIW0 290 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 OR2W1Q9Y3N9 320 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 STRCP1A6NGW2 1772 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 MMP9P14780 707 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 CDC20Q12834 499 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 ATP5G2Q06055 141 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 GPR82Q96P67 336 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 CCL28Q9NRJ3 127 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms