RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 TMEM92Q6UXU6 159 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 ADAD2Q8NCV1 583 aaKnown RBP9.73□□□□□ -0.85
MSH6-201ENST00000234420 FOXB1Q99853 325 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 KIF26BQ2KJY2 2108 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 DPRXA6NFQ7 191 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 NPIPB8E9PQR5 432 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 NPIPB9F8W1W9 429 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 NPIPB7O75200 414 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 CAPZBP47756 277 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 ZFP36L2P47974 494 aaKnown RBP9.73□□□□□ -0.85
MSH6-201ENST00000234420 ZNF415Q09FC8 603 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 C2orf83Q53S99 150 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 TMEM196Q5HYL7 178 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 PGLYRP4Q96LB8 373 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 LHX9Q9NQ69 397 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 TMEM160Q9NX00 188 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 ELF5Q9UKW6 265 aaPredicted RBP9.73□□□□□ -0.85
MSH6-201ENST00000234420 KIF13BQ9NQT8 1826 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 TRAV21A0A0B4J279 112 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 A0A1B0GW15 77 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 H3BUT2 72 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 IGFBP7Q16270 282 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 CA13Q8N1Q1 262 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 PLCH1Q4KWH8 1693 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 DOCK1Q14185 1865 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 TRAV12-3A0A0B4J271 114 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 IGHV3-35A0A0C4DH35 117 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 hADV38S2A0JD32 116 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 C19orf67A6NJJ6 358 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 C16orf97H3BN30 126 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 ATP6V0CP27449 155 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 SLC25A53Q5H9E4 307 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 SLC25A43Q8WUT9 341 aaPredicted RBP9.73□□□□□ -0.85
MSH6-201ENST00000234420 ELOVL5Q9NYP7 299 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 MTCH2Q9Y6C9 303 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 CADP27708 2225 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 CABIN1Q9Y6J0 2220 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 TGIF1Q15583 401 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 OR4X1Q8NH49 305 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 PGLYRP3Q96LB9 341 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 CXXC4Q9H2H0 198 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 IGHV3-49A0A0A0MS15 119 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 LMO7DNF2Z398 122 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 H0YIG0 161 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 HKR1P10072 659 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 GLULP15104 373 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 FBLN7Q53RD9 439 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 NOXO1Q8NFA2 376 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 TOGARAM1Q9Y4F4 1720 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 TIAM2Q8IVF5 1701 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 A0A1W2PR48 441 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 EIF4E2O60573 245 aaKnown RBP9.72□□□□□ -0.85
MSH6-201ENST00000234420 KLKB1P03952 638 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 WDR38Q5JTN6 314 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 SLC17A5Q9NRA2 495 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 B9D1Q9UPM9 204 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 DENND4AQ7Z401 1863 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 GBF1Q92538 1859 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 TSPAN2O60636 221 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 LIPFP07098 398 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 NPPBP16860 134 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 CXCL2P19875 107 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 MZB1Q8WU39 189 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 TLNRD1Q9H1K6 362 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 CISD1Q9NZ45 108 aaKnown RBP9.72□□□□□ -0.85
MSH6-201ENST00000234420 NEU3Q9UQ49 428 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 MMDQ15546 238 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 IBA57Q5T440 356 aaKnown RBP9.72□□□□□ -0.85
MSH6-201ENST00000234420 C10orf113Q5VZT2 155 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 SYT11Q9BT88 431 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 VCX2Q9H322 139 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 CA10Q9NS85 328 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 LOC105371267A0A1B0GV96 52 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 LIFP15018 202 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 FGF9P31371 208 aaPredicted RBP9.72□□□□□ -0.85
MSH6-201ENST00000234420 KIR3DL2P43630 455 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 OR1F12Q8NHA8 337 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 MRPS16Q9Y3D3 137 aaKnown RBP9.72□□□□□ -0.85
MSH6-201ENST00000234420 ZNF831Q5JPB2 1677 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 GDF9O60383 454 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 MAS1LP35410 378 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 DCAF12L2Q5VW00 463 aa9.72□□□□□ -0.85
MSH6-201ENST00000234420 IGHV1OR15-9A0A0B4J2B8 117 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 H0YL77 283 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 THY1P04216 161 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 FXYD3Q14802 87 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 JMJD6Q6NYC1 403 aaPredicted RBP9.71□□□□□ -0.85
MSH6-201ENST00000234420 MRPL24Q96A35 216 aaKnown RBP9.71□□□□□ -0.85
MSH6-201ENST00000234420 SLC25A10Q9UBX3 287 aaPredicted RBP9.71□□□□□ -0.85
MSH6-201ENST00000234420 BCL2P10415 239 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 CCR5P51681 352 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 OR4D9Q8NGE8 314 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 PLPP2O43688 288 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 RSPO2Q6UXX9 243 aaPredicted RBP9.71□□□□□ -0.85
MSH6-201ENST00000234420 C3orf56Q8N813 242 aa9.71□□□□□ -0.85
MSH6-201ENST00000234420 CTXND1A0A1B0GTU2 59 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 PQLC2LA1A4F0 135 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 LANCL1O43813 399 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 ZFPL1O95159 310 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 SELENOTP62341 195 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms