RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 BARX1Q9HBU1 254 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 COA4Q9NYJ1 87 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 RNF150Q9ULK6 438 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 KIAA2026Q5HYC2 2103 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 KBTBD11-OT1A0A1B0GTJ5 212 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 TNFRSF13BO14836 293 aaPredicted RBP11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 SELLP14151 372 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 C17orf58Q2M2W7 97 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 UBAC2Q8NBM4 344 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 DEFB108BQ8NET1 73 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 CCL13Q99616 98 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 DYNLRB1Q9NP97 96 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 KCNJ16Q9NPI9 418 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 SDHAF2Q9NX18 166 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 DCAF16Q9NXF7 216 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 GNG12Q9UBI6 72 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 CLN8Q9UBY8 286 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 PFDN2Q9UHV9 154 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 ATMQ13315 3056 aa11.87□□□□□ -0.51
RTFDC1-201ENST00000023939 PCNX1Q96RV3 2341 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 TRGV10A0A0A0MS01 117 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 ATG12O94817 140 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 GYPAP02724 150 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 P0C879 139 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 RPL30P62888 115 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 LY6DQ14210 128 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 AANATQ16613 207 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 HSD17B13Q7Z5P4 300 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 NEUROG1Q92886 237 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 LYRM2Q9NU23 88 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 PSG11Q9UQ72 335 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 MMP24Q9Y5R2 645 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 DYSFO75923 2080 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 PPIAL4EA0A075B759 164 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 IGHV3-43A0A0B4J1X8 118 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 ZNF729A6NN14 1252 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 PPIAL4DF5H284 164 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 CLDN1O95832 211 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 PPIAL4FP0DN26 164 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 IGHV3-43DP0DP04 118 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 ZNF16P17020 682 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 LOXP28300 417 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 GRNP28799 593 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 LPAR6P43657 344 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 MEF2CQ06413 473 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 DUX4L9Q6RFH8 374 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 Q6ZRM9 215 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 TCF23Q7RTU1 214 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 ZCCHC24Q8N2G6 241 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 FAM216BQ8N7L0 139 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 CD300LFQ8TDQ1 290 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 CA5BP1Q8WTZ4 195 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 SLC25A31Q9H0C2 315 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 GFOD1Q9NXC2 390 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 CISD1Q9NZ45 108 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 LAMP3Q9UQV4 416 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 PPIAL4AQ9Y536 164 aa11.86□□□□□ -0.51
RTFDC1-201ENST00000023939 DSCAMO60469 2012 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 DSPP15924 2871 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 NCOR2Q9Y618 2525 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 FAM90A26D6RGX4 464 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 ST8SIA5O15466 376 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 SIAH2O43255 324 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 FSTL3O95633 263 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 RAB7AP51149 207 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 AKR1C2P52895 323 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 BRWD1-AS2P59051 145 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 EWSR1Q01844 656 aaKnown RBP eCLIP11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 TFF3Q07654 80 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 CDSNQ15517 529 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 FGFRL1Q8N441 504 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 ZNF808Q8N4W9 903 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 OR10A7Q8NGE5 316 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 RNASE11Q8TAA1 199 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 RAB40CQ96S21 281 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 TAS2R3Q9NYW6 316 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 CACNG5Q9UF02 275 aa11.85□□□□□ -0.51
RTFDC1-201ENST00000023939 SPTA1P02549 2419 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 BORCS7-ASMTA0A0B4J1R7 106 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 hADV38S2A0JD32 116 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 DEFB108AA8MXU0 73 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 SSSCA1O60232 199 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 FGF2P09038 288 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 GPR12P47775 334 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 VAMP2P63027 116 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 BAXQ07812 192 aa11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 ZNF672Q499Z4 452 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-201ENST00000023939 SPAG16Q8N0X2 631 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms