RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ZNF826PQ6ZT77 177 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 RFESDQ8TAC1 157 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 OR51M1Q9H341 326 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 CADP27708 2225 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BKO60814 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 LYZL6O75951 148 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 IGHV3-13P01766 116 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 IGHV3-7P01780 117 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BJP06899 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BOP23527 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 LMO1P25800 156 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BBP33778 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 G6PCP35575 357 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BDP58876 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BCP62807 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST2H2BEQ16778 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 ZNF506Q5JVG8 444 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-221ENST00000640341 ZNF295-AS1Q8N0V1 137 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BHQ93079 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 RCC1LQ96I51 464 aaKnown RBP12.37□□□□□ -0.43
SCARB2-221ENST00000640341 SNX22Q96L94 193 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 OR4C12Q96R67 309 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BNQ99877 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 HIST1H2BMQ99879 126 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 RBKSQ9H477 322 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 IGHV3-43A0A0B4J1X8 118 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 CLEC18AA5D8T8 446 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A10PA6NDY2 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A18PA6NE21 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A16PA6NEW6 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A20PA6NIJ5 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A8PA6NJQ4 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A7PA6NKC0 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A22PA8MWA6 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A12PA8MX19 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A5PA8MXJ8 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 DEFB108AA8MXU0 73 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A23PA8MXZ1 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 PPP1R2P9O14990 202 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A15PP0C7V4 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A13PP0C7W8 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A14PP0C7W9 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A24PP0C7X0 464 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 IGHV3-43DP0DP04 118 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 ARR3P36575 388 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 H1FOOQ8IZA3 346 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-221ENST00000640341 CLEC18CQ8NCF0 446 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 LHX4Q969G2 390 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 FAM210BQ96KR6 192 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 RAB40CQ96S21 281 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 ROS1P08922 2347 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 KIAA1324LA8MWY0 1029 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-221ENST00000640341 C9orf172C9J069 976 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 YKT6O15498 198 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 RAMP3O60896 148 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 ZNF726P1Q15940 193 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
SCARB2-221ENST00000640341 CDX2Q99626 313 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-221ENST00000640341 SLC39A9Q9NUM3 307 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 ABI3Q9P2A4 366 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 CLN8Q9UBY8 286 aa12.37□□□□□ -0.43
SCARB2-221ENST00000640341 A0A1B0GU03 582 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 IFITM10A6NMD0 228 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 BCL2P10415 239 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 ZNF383Q8NA42 475 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 TMEM45BQ96B21 275 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 FAM234AQ9H0X4 552 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 ARRDC1-AS1Q9H2J1 176 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 OBP2BQ9NPH6 170 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 AURKAIP1Q9NWT8 199 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-221ENST00000640341 LOC102723971A0A1B0GUV8 181 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 WNT9BO14905 357 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 MEOX1P50221 254 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 KHDC3LQ587J8 217 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 DCAF10Q5QP82 559 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 FGFRL1Q8N441 504 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 CABLES2Q9BTV7 478 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 STRADBQ9C0K7 418 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 OR2D2Q9H210 308 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 TINAGQ9UJW2 476 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 PPIHO43447 177 aaKnown RBP12.36□□□□□ -0.43
SCARB2-221ENST00000640341 OR3A1P47881 315 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 HBG1P69891 147 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 HBG2P69892 147 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 DRAM1Q8N682 238 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 SCCPDHQ8NBX0 429 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 FRZBQ92765 325 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 GAB2Q9UQC2 676 aa12.36□□□□□ -0.43
SCARB2-221ENST00000640341 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 SOD3P08294 240 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 TRGC1P0CF51 173 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 PGA5P0DJD9 388 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 GLIPR1P48060 266 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 ARG2P78540 354 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 AESQ08117 197 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 HAPLN4Q86UW8 402 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms