RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 SNAPINO95295 136 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 SFTA3P0C7M3 94 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 LMO1P25800 156 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 GNRHRP30968 328 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 CD200P41217 278 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 FGF12P61328 243 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 MEX3BQ6ZN04 569 aaKnown RBP12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 Q6ZS49 121 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM58AQ8N1B3 248 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 SLC35G3Q8N808 338 aa12.89□□□□□ -0.35
CHRNA7-217ENST00000636603 DYSFO75923 2080 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 VSTM5A8MXK1 200 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 PHF1O43189 567 aaPredicted RBP12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 NAPSAO96009 420 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 PGA5P0DJD9 388 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 CD80P33681 288 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 NHLH2Q02577 135 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 HERPUD1Q15011 391 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 LGI3Q8N145 548 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 RCL1Q9Y2P8 373 aaKnown RBP12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 POLDIP2Q9Y2S7 368 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 PRELID3BQ9Y3B1 194 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 KLF2Q9Y5W3 355 aaPredicted RBP12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 C17orf100A8MU93 164 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 HSPB6O14558 160 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 GPR137BO60478 399 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 NXPH2O95156 264 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 HEXAP06865 529 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 SPP1P10451 314 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 EGR1P18146 543 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 F2RL1P55085 397 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM201AQ5SY85 155 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 MUC15Q8N387 334 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM222BQ8WU58 562 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 Q9N2K0 584 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 DCAF16Q9NXF7 216 aa12.88□□□□□ -0.35
CHRNA7-217ENST00000636603 MPPED1O15442 326 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 SCTP09683 121 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 DANCRP0C864 163 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 P2RY1P47900 373 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 FHITP49789 147 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 GPR157Q5UAW9 335 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 OR10Z1Q8NGY1 313 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 LRRC29Q8WV35 223 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 KIRREL1Q96J84 757 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 GPHA2Q96T91 129 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 SH3BGRL3Q9H299 93 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 DYNLRB1Q9NP97 96 aa12.87□□□□□ -0.35
CHRNA7-217ENST00000636603 IGKV1-6A0A0C4DH72 117 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 C3orf85A0A1B0GTC6 90 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 MEX3AA1L020 520 aaKnown RBP12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 A1L4Q6 167 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A10PA6NDY2 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A18PA6NE21 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A16PA6NEW6 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A20PA6NIJ5 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A8PA6NJQ4 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A7PA6NKC0 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A22PA8MWA6 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A12PA8MX19 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A5PA8MXJ8 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A23PA8MXZ1 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 PRSS44E7EML9 344 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 GLAP06280 429 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A15PP0C7V4 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 SEC11BP0C7V7 166 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A13PP0C7W8 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A14PP0C7W9 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 FAM90A24PP0C7X0 464 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 GLP1RP43220 463 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 DVL1P1P54792 670 aaPredicted RBP12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 IL13RA2Q14627 380 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 ETV3LQ6ZN32 361 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 TMEM222Q9H0R3 208 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 GCM1Q9NP62 436 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 IL19Q9UHD0 177 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 POMT1Q9Y6A1 747 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 IGKV1D-13A0A0B4J2D9 117 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 PTBP3O95758 552 aaKnown RBP12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 IGKV1-13P0DP09 117 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 PVALBP20472 110 aaPredicted RBP12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 HERV-K104P61576 105 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 MZT1Q08AG7 82 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 SRSF7Q16629 238 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 SWI5Q1ZZU3 235 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 SECTM1Q8WVN6 248 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 ZFP57Q9NU63 452 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 OR14J1Q9UGF5 321 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 CACFD1Q9UGQ2 172 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 TMED3Q9Y3Q3 217 aa12.86□□□□□ -0.35
CHRNA7-217ENST00000636603 CRYBG3Q68DQ2 2970 aa12.85□□□□□ -0.35
CHRNA7-217ENST00000636603 IGHV3OR15-7A0A075B7D8 119 aa12.85□□□□□ -0.35
CHRNA7-217ENST00000636603 TRDCB7Z8K6 153 aa12.85□□□□□ -0.35
CHRNA7-217ENST00000636603 B9A039 149 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms