RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 NSUN5P2Q63ZY6 315 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 ZNF383Q8NA42 475 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 FLVCR1-AS1Q8TAF5 88 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 SPTA1P02549 2419 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 NKX2-8O15522 239 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 CLDN14O95500 239 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 GAPDHP04406 335 aaKnown RBP13.92□□□□□ -0.18
GABRB3-215ENST00000622697 FBP1P09467 338 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 FAM157CP0CG43 387 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 RNF7Q9UBF6 113 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 DOCK6Q96HP0 2047 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 LYPD3O95274 346 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 PRDX2P32119 198 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 VAMP3Q15836 100 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 MRPL54Q6P161 138 aaKnown RBP13.92□□□□□ -0.18
GABRB3-215ENST00000622697 OR1L1Q8NH94 360 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 DOCK4Q8N1I0 1966 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 IGKV3D-11A0A0A0MRZ8 115 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 H0YL77 283 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 HNRNPA3P51991 378 aaKnown RBP13.92□□□□□ -0.18
GABRB3-215ENST00000622697 GPR146Q96CH1 333 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 SAP30LQ9HAJ7 183 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 PIPOXQ9P0Z9 390 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 ZNF658BQ4V348 819 aaPredicted RBP13.91□□□□□ -0.18
GABRB3-215ENST00000622697 LINC00596Q86U02 117 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 SRD5A3Q9H8P0 318 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 GAS1P54826 345 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 CCL8P80075 99 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 H0Y980 276 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 STARD6P59095 220 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 ZNF818PQ6ZRF7 136 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 SELENOHQ8IZQ5 122 aaKnown RBP13.91□□□□□ -0.18
GABRB3-215ENST00000622697 FAM122AQ96E09 287 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 SCN5AQ14524 2016 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 CRISP2P16562 243 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 ZNF837Q96EG3 531 aaPredicted RBP13.91□□□□□ -0.18
GABRB3-215ENST00000622697 DLL3Q9NYJ7 618 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 RLFQ13129 1914 aa13.91□□□□□ -0.18
GABRB3-215ENST00000622697 TRAV38-1A0A0B4J264 116 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 CTXND1A0A1B0GTU2 59 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 A0A1W2PN81 502 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 OR2J3O76001 311 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 BCL2P10415 239 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 AMTP48728 403 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 ASPHD2Q6ICH7 369 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 WIPI2Q9Y4P8 454 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 K7ESF4 209 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 PAX6P26367 422 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 HARBI1Q96MB7 349 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 AAMDCQ9H7C9 122 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 TECRQ9NZ01 308 aaKnown RBP13.9□□□□□ -0.18
GABRB3-215ENST00000622697 KHDC3LQ587J8 217 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 C11orf42Q8N5U0 333 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 B4DEV8 164 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 CA11O75493 328 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 EFEMP2O95967 443 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 NPY1RP25929 384 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 LTBRP36941 435 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 WNT5AP41221 380 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 OR4F17Q8NGA8 305 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 TMEM210A6NLX4 147 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 POC1AQ8NBT0 407 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 ANAPC16Q96DE5 110 aa13.9□□□□□ -0.18
GABRB3-215ENST00000622697 CHCHD2Q9Y6H1 151 aaPredicted RBP13.9□□□□□ -0.18
GABRB3-215ENST00000622697 A0A087X0M5 115 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 A0A1B0GX30 115 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 CSN3P07498 182 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 ZNF708P17019 499 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 SUCLG1P53597 346 aaKnown RBP13.89□□□□□ -0.19
GABRB3-215ENST00000622697 FA2HQ7L5A8 372 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 ADTRPQ96IZ2 230 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 TP53RKQ96S44 253 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 ASXL3Q9C0F0 2248 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 SRSF10O75494 262 aaKnown RBP13.89□□□□□ -0.19
GABRB3-215ENST00000622697 TRGC2P03986 189 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 KLHDC1Q8N7A1 406 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 SOSTQ9BQB4 213 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 SLC2A8Q9NY64 477 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 SIP14410 1827 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 CA5BP1Q8WTZ4 195 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 SIRT7Q9NRC8 400 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 IL17BQ9UHF5 180 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 APC2O95996 2303 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 J3QRE1 110 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 TMEM187Q14656 261 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 ETFRF1Q6IPR1 90 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 FGFRL1Q8N441 504 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 OR1L6Q8NGR2 347 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 CCL13Q99616 98 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 SEBOXQ9HB31 216 aaPredicted RBP13.89□□□□□ -0.19
GABRB3-215ENST00000622697 ZNF253O75346 499 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 CELA3AP09093 270 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 SMIM6P0DI80 62 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 CD1BP29016 333 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 IER3P46695 156 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 DHRS11Q6UWP2 260 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms