RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 OR1A1Q9P1Q5 309 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF69Q9UC07 566 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 SLC23A1Q9UHI7 598 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 RPUSD1Q9UJJ7 312 aaKnown RBP9.4□□□□□ -0.9
SLIRP-212ENST00000613856 A0A1W2PPH5 198 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 INMT-MINDY4F8WBC2 141 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 ITGB1BP1O14713 200 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 ARPC1BO15143 372 aaKnown RBP9.39□□□□□ -0.91
SLIRP-212ENST00000613856 PEX14O75381 377 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 RBP4P02753 201 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 H2AFB2P0C5Z0 115 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 ZNF728P0DKX0 622 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 ZNF16P17020 682 aaPredicted RBP9.39□□□□□ -0.91
SLIRP-212ENST00000613856 AADACP22760 399 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 NFYAP23511 347 aaPredicted RBP9.39□□□□□ -0.91
SLIRP-212ENST00000613856 LOXL3P58215 753 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 HERV-K104P61576 105 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 CD276Q5ZPR3 534 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 HEPN1Q6WQI6 88 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 NARFLQ9H6Q4 476 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 GFOD1Q9NXC2 390 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 IDI2-AS1Q9NZ38 188 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 CDC42EP3Q9UKI2 254 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 VSIG4Q9Y279 399 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 OR2W1Q9Y3N9 320 aa9.39□□□□□ -0.91
SLIRP-212ENST00000613856 TRAV6A0A075B6T7 132 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 FAM172BPA6NC97 362 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 C17orf98A8MV24 154 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 C22orf46C9J442 243 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 HSPA12AO43301 675 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 YPEL1O60688 119 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 PRAF2O60831 178 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 RGS11O94810 467 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 Q3ZCU0 254 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 SLC38A6Q8IZM9 456 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 OR52L2PQ8NGH6 319 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 RFESDQ8TAC1 157 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 UBALD1Q8TB05 177 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 MARCH1Q8TCQ1 289 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 EDARADDQ8WWZ3 215 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 DACT3Q96B18 629 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-212ENST00000613856 ZNF486Q96H40 463 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-212ENST00000613856 C1orf159Q96HA4 380 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 YPEL2Q96QA6 119 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 ALX4Q9H161 411 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-212ENST00000613856 OR2S2Q9NQN1 319 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 RDH8Q9NYR8 311 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 GPR132Q9UNW8 380 aa9.38□□□□□ -0.91
SLIRP-212ENST00000613856 POLR3KQ9Y2Y1 108 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-212ENST00000613856 LOC105371242A0A075B767 164 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 PPIAL4CA0A0B4J2A2 164 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 IGHV4-61A0A0C4DH41 118 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 MEX3AA1L020 520 aaKnown RBP9.37□□□□□ -0.91
SLIRP-212ENST00000613856 ENSAO43768 121 aaKnown RBP9.37□□□□□ -0.91
SLIRP-212ENST00000613856 FOXH1O75593 365 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 DHFRP00374 187 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 IL5P05113 134 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 LIPFP07098 398 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 CTSDP07339 412 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-212ENST00000613856 PPIAL4GP0DN37 164 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 CCL3L1P16619 93 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 CEACAM6P40199 344 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 TAS2R31P59538 309 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 UBE2MP61081 183 aaKnown RBP9.37□□□□□ -0.91
SLIRP-212ENST00000613856 GNMTQ14749 295 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 MSMO1Q15800 293 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 LPCAT3Q6P1A2 487 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 FAHD2BQ6P2I3 314 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-212ENST00000613856 KIR3DL3Q8N743 410 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 ZFAND1Q8TCF1 268 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 FAHD2AQ96GK7 314 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 RSRP1Q9BUV0 290 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 BEX2Q9BXY8 128 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 TMPRSS13Q9BYE2 586 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 GNG12Q9UBI6 72 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 FLVCR2Q9UPI3 526 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 MEGF8Q7Z7M0 2845 aa9.37□□□□□ -0.91
SLIRP-212ENST00000613856 ARHGAP32A7KAX9 2087 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 A0A087X0M5 115 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 A0A0B4J293 547 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 IGKV1D-13A0A0B4J2D9 117 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 A0A1B0GX30 115 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 C7orf66A4D0T2 115 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 M0R1W7 72 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 RLN1P04808 185 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 IGHV4-31P0DP07 118 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 IGKV1-13P0DP09 117 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 PGAM2P15259 253 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 PPP1CCP36873 323 aaKnown RBP9.36□□□□□ -0.91
SLIRP-212ENST00000613856 LUMP51884 338 aaPredicted RBP9.36□□□□□ -0.91
SLIRP-212ENST00000613856 FXYD4P59646 89 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 RND3P61587 244 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 PAX2Q02962 417 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 TATDN3Q17R31 274 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 MORN2Q502X0 79 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 PRAMEF5Q5TYX0 476 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 SLC25A42Q86VD7 318 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 LDLRAD3Q86YD5 345 aa9.36□□□□□ -0.91
SLIRP-212ENST00000613856 C11orf42Q8N5U0 333 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms