RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RAMP3O60896 148 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 NAPSAO96009 420 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 IGKV1D-33P01593 117 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 IGKV1-33P01594 117 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 G6PCP35575 357 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 CHRNA7P36544 502 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 ZNF66Q6ZN08 573 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 HIST1H2BLQ99880 126 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 KIR2DS1A0A191URI9 304 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 TOX3O15405 576 aaPredicted RBP17.34■□□□□ 0.37
SSBP3-216ENST00000610401 PDGFBP01127 241 aaPredicted RBP17.34■□□□□ 0.37
SSBP3-216ENST00000610401 HBE1P02100 147 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 S100GP29377 79 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 SRD5A2P31213 254 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 KIR2DS4P43632 304 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 FAM3BP58499 235 aaPredicted RBP17.34■□□□□ 0.37
SSBP3-216ENST00000610401 IL24Q13007 206 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 KIR2DS1Q14954 304 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 C1QL4Q86Z23 238 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 RFESDQ8TAC1 157 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 CA5BP1Q8WTZ4 195 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 PGPEP1LA6NFU8 196 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 IGKV1-5P01602 117 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 CD33P20138 364 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 CEACAM6P40199 344 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 TPRP12270 2363 aaKnown RBP17.33■□□□□ 0.37
SSBP3-216ENST00000610401 IGHV3-43A0A0B4J1X8 118 aa17.33■□□□□ 0.37
SSBP3-216ENST00000610401 CLEC18AA5D8T8 446 aa17.33■□□□□ 0.37
SSBP3-216ENST00000610401 IGHV3-43DP0DP04 118 aa17.33■□□□□ 0.37
SSBP3-216ENST00000610401 IL2RGP31785 369 aa17.33■□□□□ 0.37
SSBP3-216ENST00000610401 CYB561P49447 251 aa17.33■□□□□ 0.37
SSBP3-216ENST00000610401 COL10A1Q03692 680 aa17.33■□□□□ 0.37
SSBP3-216ENST00000610401 CLEC18CQ8NCF0 446 aa17.33■□□□□ 0.37
SSBP3-216ENST00000610401 ZDHHC16Q969W1 377 aa17.33■□□□□ 0.37
SSBP3-216ENST00000610401 MDH2P40926 338 aaKnown RBP17.33■□□□□ 0.36
SSBP3-216ENST00000610401 MAGEA5P43359 124 aa17.33■□□□□ 0.36
SSBP3-216ENST00000610401 NCR3LG1Q68D85 454 aa17.33■□□□□ 0.36
SSBP3-216ENST00000610401 FAM185AQ8N0U4 392 aa17.33■□□□□ 0.36
SSBP3-216ENST00000610401 OR4X1Q8NH49 305 aa17.33■□□□□ 0.36
SSBP3-216ENST00000610401 SPTBN2O15020 2390 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 SLC35E3Q7Z769 313 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 ATG101Q9BSB4 218 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 SF3B5Q9BWJ5 86 aaKnown RBP17.32■□□□□ 0.36
SSBP3-216ENST00000610401 PRDM6Q9NQX0 595 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 DLL3Q9NYJ7 618 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 K7ESF4 209 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 CDIPTO14735 213 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 DFFBO76075 338 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 HIST1H1BP16401 226 aaKnown RBP17.32■□□□□ 0.36
SSBP3-216ENST00000610401 CYB5R2Q6BCY4 276 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 FAM58AQ8N1B3 248 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 REPIN1Q9BWE0 567 aaKnown RBP17.32■□□□□ 0.36
SSBP3-216ENST00000610401 FUT9Q9Y231 359 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 BTBD17A6NE02 478 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 H0Y980 276 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 CEACAM21Q3KPI0 293 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 ALKBH6Q3KRA9 238 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 MCEMP1Q8IX19 187 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 RPP25LQ8N5L8 163 aaKnown RBP17.32■□□□□ 0.36
SSBP3-216ENST00000610401 OR51G1Q8NGK1 321 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 OR5D13Q8NGL4 314 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 C1QTNF5Q9BXJ0 243 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 FZR1Q9UM11 496 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 SIT1Q9Y3P8 196 aa17.32■□□□□ 0.36
SSBP3-216ENST00000610401 A0A1B0GU03 582 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 XKRY2A2RUG3 117 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 CYTIPO60759 359 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 GZMHP20718 246 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 DDTP30046 118 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 TGFBR3Q03167 851 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 BAXQ07812 192 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 ZNF525Q8N782 197 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 TMEM105Q8N8V8 129 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 PLSCR2Q9NRY7 297 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 PRSS50Q9UI38 385 aa17.31■□□□□ 0.36
SSBP3-216ENST00000610401 ANKRD30BLA7E2S9 258 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 PTBP3O95758 552 aaKnown RBP17.3■□□□□ 0.36
SSBP3-216ENST00000610401 ZFP36L1Q07352 338 aaKnown RBP17.3■□□□□ 0.36
SSBP3-216ENST00000610401 SLC38A11Q08AI6 406 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 GCSAMLQ5JQS6 135 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 KDF1Q8NAX2 398 aaPredicted RBP17.3■□□□□ 0.36
SSBP3-216ENST00000610401 OR5P3Q8WZ94 311 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 SDF2L1Q9HCN8 221 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 ZNF324BQ6AW86 544 aaPredicted RBP17.3■□□□□ 0.36
SSBP3-216ENST00000610401 GPR87Q9BY21 358 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 LOC102723996A0A087X1L8 192 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 C1QTNF9BB2RNN3 333 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 TSTD3H0UI37 97 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 CYB5R3P00387 301 aaPredicted RBP17.3■□□□□ 0.36
SSBP3-216ENST00000610401 Q6ZSR3 168 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 IL36GQ9NZH8 169 aa17.3■□□□□ 0.36
SSBP3-216ENST00000610401 ZNF826PQ6ZT77 177 aa17.29■□□□□ 0.36
SSBP3-216ENST00000610401 NUFIP2Q7Z417 695 aaKnown RBP17.29■□□□□ 0.36
SSBP3-216ENST00000610401 MISP3Q96FF7 219 aa17.29■□□□□ 0.36
SSBP3-216ENST00000610401 MGAQ8IWI9 3026 aa17.29■□□□□ 0.36
SSBP3-216ENST00000610401 DMXL1Q9Y485 3027 aa17.29■□□□□ 0.36
SSBP3-216ENST00000610401 CELA3BP08861 270 aa17.29■□□□□ 0.36
SSBP3-216ENST00000610401 TFF3Q07654 80 aa17.29■□□□□ 0.36
SSBP3-216ENST00000610401 CST9LP1Q5W188 147 aa17.29■□□□□ 0.36
SSBP3-216ENST00000610401 H1FOOQ8IZA3 346 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms