RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 STEAP1BQ6NZ63 245 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ZNF529Q6P280 563 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ZNF788Q6ZQV5 615 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 IDO2Q6ZQW0 420 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 Q6ZSR3 168 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 SLC51BQ86UW2 128 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 LYPD6Q86Y78 171 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 C11orf53Q8IXP5 236 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ARRDC1Q8N5I2 433 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 OR2AK2Q8NG84 335 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 OR8H1Q8NGG4 311 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 OR5D14Q8NGL3 314 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 OR4C16Q8NGL9 310 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 OR10Z1Q8NGY1 313 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 SCARB1Q8WTV0 552 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ZNRF4Q8WWF5 429 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 OR5P3Q8WZ94 311 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 TNFRSF14Q92956 283 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ORAI1Q96D31 301 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 RCC1LQ96I51 464 aaKnown RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 ZNF488Q96MN9 340 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 WWC2-AS2Q96NR7 200 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 SCGB3A2Q96PL1 93 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ABHD6Q9BV23 337 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 TTTY10Q9BZA0 68 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 GPR61Q9BZJ8 451 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 RGCCQ9H4X1 137 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ZNF702PQ9H963 129 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 TMEM138Q9NPI0 162 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 KLK11Q9UBX7 282 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 OR52A1Q9UKL2 312 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 TCF19Q9Y242 345 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 KLHDC2Q9Y2U9 406 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 IGKV1D-17A0A075B6S4 117 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 TRAV8-7A0A075B6U6 113 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 A0A0B4J2A0 478 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 A0A0U1RQV5 110 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 TMEM272A0A1B0GTI8 110 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 TMEM269A0A1B0GVZ9 245 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 RPS10-NUDT3A0A1W2PQS6 291 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 LEUTXA8MZ59 168 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 PRR32B1ATL7 298 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 MCRIP1C9JLW8 97 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 G3V3Q6 166 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 K7EIL1 84 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 PSMD9O00233 223 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 OR2F2O95006 317 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 RPP14O95059 124 aaKnown RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 CRYZL1O95825 349 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 MAS1P04201 325 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 SLC25A4P12235 298 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 GTF2F2P13984 249 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 MGMTP16455 207 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 NAT1P18440 290 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 CXCL3P19876 107 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 GABRR1P24046 479 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 LMO1P25800 156 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 BDKRB2P30411 391 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 HAAOP46952 286 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 SNU13P55769 128 aaKnown RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 TSPAN5P62079 268 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 RPS27AP62979 156 aaKnown RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 CYCSP99999 105 aaKnown RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 OR2F1Q13607 317 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 EXOSC2Q13868 293 aaKnown RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 RBM39Q14498 530 aaKnown RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 SURF2Q15527 256 aaPredicted RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 AANATQ16613 207 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 C2orf76Q3KRA6 126 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 LGALSLQ3ZCW2 172 aaPredicted RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 ABCA11PQ4W5N1 156 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 ATPAF1Q5TC12 328 aaPredicted RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 TMEM200BQ69YZ2 307 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 PRSS45Q7RTY3 260 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 ELMOD2Q8IZ81 293 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 OR8H3Q8N146 312 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 ZNF561Q8N587 486 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 OR51D1Q8NGF3 324 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 OR8B12Q8NGG6 310 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 OR13C3Q8NGS6 347 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 PP6455Q8WZ26 134 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 AQP3Q92482 292 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 FAM46BQ96A09 425 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 SPSB4Q96A44 273 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 GINS4Q9BRT9 223 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 SLC25A32Q9H2D1 315 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 GPR173Q9NS66 373 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 SLC23A1Q9UHI7 598 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 SHPKQ9UHJ6 478 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 ANAPC10Q9UM13 185 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 PIGLQ9Y2B2 252 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 POLDIP2Q9Y2S7 368 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 TSSC4Q9Y5U2 329 aaPredicted RBP4.19□□□□□ -1.74
VRK3-226ENST00000602029 STARD9Q9P2P6 4700 aa4.19□□□□□ -1.74
VRK3-226ENST00000602029 PIGBOS1A0A0B4J2F0 54 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 A0A1B0GTI1 187 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 LOC107986453A0A1B0GWG9 222 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 FAM230AA0A1W2PPH8 454 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 A0A1W2PPK0 400 aa4.18□□□□□ -1.74
VRK3-226ENST00000602029 WI2-2373I1.2A0A1W2PRP0 233 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms