RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 A0A096LPE4 126 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 A0A1W2PPZ6 126 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 C5orf49A4QMS7 147 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 ACTL6AO96019 429 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 IL2RAP01589 272 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 LGALS7P47929 136 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 PRSS12P56730 875 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
LIG1-220ENST00000601091 FAM166AQ6J272 317 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 SLC35E3Q7Z769 313 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 APH1AQ96BI3 265 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 A0A1B0GTI1 187 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 OR4A8P0C604 315 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 CCL3P10147 92 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 PDLIM4P50479 330 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 MRPS34P82930 218 aaKnown RBP9.02□□□□□ -0.97
LIG1-220ENST00000601091 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.01□□□□□ -0.97
LIG1-220ENST00000601091 C7orf77A4D0Y5 90 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 SSSCA1O60232 199 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 SRD5A2P31213 254 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 PAX2Q02962 417 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 MMDQ15546 238 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 OR1J1Q8NGS3 322 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 OR51H1Q8NH63 302 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 MRPL24Q96A35 216 aaKnown RBP9.01□□□□□ -0.97
LIG1-220ENST00000601091 GALNT14Q96FL9 552 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 AK3Q9UIJ7 227 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 RCL1Q9Y2P8 373 aaKnown RBP9.01□□□□□ -0.97
LIG1-220ENST00000601091 C9orf172C9J069 976 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 H3BMH7 237 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 DVL1O14640 695 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 NXPH3O95157 252 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 ADCYAP1P18509 176 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 HBG1P69891 147 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 HBG2P69892 147 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 UBE2V2Q15819 145 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 ANKRD55Q3KP44 614 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 GCSAMLQ5JQS6 135 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 LINC00696Q6ZRV3 163 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 RDH5Q92781 318 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 DUX5Q96PT3 197 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 DERL1Q9BUN8 251 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 CEACAM4O75871 244 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 S1PR2O95136 353 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 ZNF205O95201 554 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 LIFP15018 202 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 AADACP22760 399 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 IL13RA2Q14627 380 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 CSRP2Q16527 193 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 ZNF766Q5HY98 468 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 FAM27BQ5VT28 67 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 TEX38Q6PEX7 206 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 OR4D5Q8NGN0 318 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 OR2Y1Q8NGV0 311 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 OR5B12Q96R08 314 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 WFDC1Q9HC57 220 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 DENND4AQ7Z401 1863 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 RALGAPA1Q6GYQ0 2036 aa9.01□□□□□ -0.97
LIG1-220ENST00000601091 EYSQ5T1H1 3165 aa9□□□□□ -0.97
LIG1-220ENST00000601091 hCG_38984A0A1B0GV85 526 aa9□□□□□ -0.97
LIG1-220ENST00000601091 ZNF724A8MTY0 619 aa9□□□□□ -0.97
LIG1-220ENST00000601091 GEMIN2O14893 280 aaKnown RBP9□□□□□ -0.97
LIG1-220ENST00000601091 HINT1P49773 126 aaPredicted RBP9□□□□□ -0.97
LIG1-220ENST00000601091 SRSF6Q13247 344 aaKnown RBP9□□□□□ -0.97
LIG1-220ENST00000601091 AWAT1Q58HT5 328 aa9□□□□□ -0.97
LIG1-220ENST00000601091 PLAC9Q5JTB6 97 aa9□□□□□ -0.97
LIG1-220ENST00000601091 OR5AS1Q8N127 324 aa9□□□□□ -0.97
LIG1-220ENST00000601091 OR4S2Q8NH73 311 aa9□□□□□ -0.97
LIG1-220ENST00000601091 OR10D3Q8NH80 312 aa9□□□□□ -0.97
LIG1-220ENST00000601091 OR10C1Q96KK4 312 aa9□□□□□ -0.97
LIG1-220ENST00000601091 OR2V2Q96R30 315 aa9□□□□□ -0.97
LIG1-220ENST00000601091 MESP1Q9BRJ9 268 aa9□□□□□ -0.97
LIG1-220ENST00000601091 HDHD3Q9BSH5 251 aaPredicted RBP9□□□□□ -0.97
LIG1-220ENST00000601091 PLEKHF2Q9H8W4 249 aa9□□□□□ -0.97
LIG1-220ENST00000601091 WDR54Q9H977 334 aa9□□□□□ -0.97
LIG1-220ENST00000601091 MFNGO00587 321 aa9□□□□□ -0.97
LIG1-220ENST00000601091 TDGF1P13385 188 aa9□□□□□ -0.97
LIG1-220ENST00000601091 TSPO2Q5TGU0 170 aa9□□□□□ -0.97
LIG1-220ENST00000601091 ZNF788Q6ZQV5 615 aa9□□□□□ -0.97
LIG1-220ENST00000601091 ZDHHC23Q8IYP9 409 aa9□□□□□ -0.97
LIG1-220ENST00000601091 ZNF611Q8N823 705 aa9□□□□□ -0.97
LIG1-220ENST00000601091 ZNF441Q8N8Z8 693 aa9□□□□□ -0.97
LIG1-220ENST00000601091 ZFP62Q8NB50 900 aaPredicted RBP9□□□□□ -0.97
LIG1-220ENST00000601091 RBMXL1Q96E39 390 aaKnown RBP9□□□□□ -0.97
LIG1-220ENST00000601091 AQP10Q96PS8 301 aa9□□□□□ -0.97
LIG1-220ENST00000601091 SELENOKQ9Y6D0 94 aa9□□□□□ -0.97
LIG1-220ENST00000601091 FAM166BA8MTA8 275 aa9□□□□□ -0.97
LIG1-220ENST00000601091 DEGS1O15121 323 aa9□□□□□ -0.97
LIG1-220ENST00000601091 RBFOX2O43251 390 aaKnown RBP eCLIP9□□□□□ -0.972e-6■□□□□ 9.8
LIG1-220ENST00000601091 AMBPP02760 352 aa9□□□□□ -0.97
LIG1-220ENST00000601091 BMP5P22003 454 aa9□□□□□ -0.97
LIG1-220ENST00000601091 ANOS1P23352 680 aa9□□□□□ -0.97
LIG1-220ENST00000601091 FABP6P51161 128 aa9□□□□□ -0.97
LIG1-220ENST00000601091 MZT1Q08AG7 82 aa9□□□□□ -0.97
LIG1-220ENST00000601091 LIAT1Q6ZQX7 453 aa9□□□□□ -0.97
LIG1-220ENST00000601091 LINC01551Q86U37 167 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms