RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ADAD2Q8NCV1 583 aaKnown RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 OR8B3Q8NGG8 313 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 RFESDQ8TAC1 157 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 UBALD1Q8TB05 177 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 ZNF431Q8TF32 576 aaPredicted RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 FAM216AQ8WUB2 273 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 CAPSLQ8WWF8 208 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 TOMM40LQ969M1 308 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 TMEM230Q96A57 120 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 DACT3Q96B18 629 aaPredicted RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 NEIL1Q96FI4 390 aaPredicted RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 OR8B2Q96RD0 313 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 SEC22CQ9BRL7 303 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 RSRP1Q9BUV0 290 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 BARX1Q9HBU1 254 aaPredicted RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 OR2S2Q9NQN1 319 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 C19orf12Q9NSK7 152 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 RDH8Q9NYR8 311 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 CALYQ9NYX4 217 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 JPT1Q9UK76 154 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 YPEL1O60688 119 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 CRLF1O75462 422 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 AKR1C4P17516 323 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 GNRHRP30968 328 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 PDLIM4P50479 330 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 LUMP51884 338 aaPredicted RBP11.1□□□□□ -0.63
VMP1-217ENST00000593168 KRTAP1-1Q07627 177 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 BAMBIQ13145 260 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 DHRS2Q13268 280 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 C11orf91Q3C1V1 193 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 LY6G6FQ5SQ64 297 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 LYG2Q86SG7 212 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 FAM185AQ8N0U4 392 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 OR10V1Q8NGI7 309 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 OR52M1Q8NGK5 317 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 YPEL2Q96QA6 119 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 NEURL2Q9BR09 285 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 SLC5A7Q9GZV3 580 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 MED28Q9H204 178 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 GAL3ST2Q9H3Q3 398 aa11.1□□□□□ -0.63
VMP1-217ENST00000593168 IGKV1D-13A0A0B4J2D9 117 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 C9orf170A2RU37 121 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 F5H0A9 414 aaPredicted RBP11.09□□□□□ -0.63
VMP1-217ENST00000593168 GPR31O00270 319 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 IGKV1-13P0DP09 117 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 PI3P19957 117 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 LOXL3P58215 753 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 RND3P61587 244 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 PPP1R1AQ13522 171 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 ABCA11PQ4W5N1 156 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 WDR25Q64LD2 544 aaPredicted RBP11.09□□□□□ -0.63
VMP1-217ENST00000593168 TMEM200BQ69YZ2 307 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 C11orf88Q6PI97 169 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 CCDC71LQ8N9Z2 235 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 OR52B4Q8NGK2 314 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
VMP1-217ENST00000593168 AKR1E2Q96JD6 320 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 GSX2Q9BZM3 304 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 IDI2-AS1Q9NZ38 188 aa11.09□□□□□ -0.63
VMP1-217ENST00000593168 DOCK11Q5JSL3 2073 aa11.08□□□□□ -0.63
VMP1-217ENST00000593168 MEX3AA1L020 520 aaKnown RBP11.08□□□□□ -0.64
VMP1-217ENST00000593168 CRYM-AS1A6NIL9 109 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 NDUFS8O00217 210 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 SSNA1O43805 119 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 RGS11O94810 467 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 SFT2D2O95562 160 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 DUS4LO95620 317 aaKnown RBP11.08□□□□□ -0.64
VMP1-217ENST00000593168 HLA-AP01891 365 aaKnown RBP11.08□□□□□ -0.64
VMP1-217ENST00000593168 PIGPP57054 158 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 ZNF273Q14593 569 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 MSMO1Q15800 293 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 MORN2Q502X0 79 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 LDLRAD3Q86YD5 345 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 SGPP2Q8IWX5 399 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 C12orf45Q8N5I9 185 aaPredicted RBP11.08□□□□□ -0.64
VMP1-217ENST00000593168 ZNF525Q8N782 197 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 C8orf46Q8TAG6 207 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 MITD1Q8WV92 249 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 PPP1R14BQ96C90 147 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 CCL28Q9NRJ3 127 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 SLC2A9Q9NRM0 540 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 GFOD1Q9NXC2 390 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 GNG12Q9UBI6 72 aa11.08□□□□□ -0.64
VMP1-217ENST00000593168 MALRD1Q5VYJ5 2156 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 A0A0B4J2A0 478 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 A0A1W2PPH5 198 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 SLC22A5O76082 557 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 OR8U9P0C7N5 309 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 SULT1A3P0DMM9 295 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 SULT1A4P0DMN0 295 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 VAMP1P23763 118 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 ATP5J2P56134 94 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 DLX6P56179 175 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms