RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
SMARCE1-213ENST00000578044 NPBQ8NG41 125 aa11.37□□□□□ -0.59
SMARCE1-213ENST00000578044 OR1L1Q8NH94 360 aa11.37□□□□□ -0.59
SMARCE1-213ENST00000578044 C4orf3Q8WVX3 66 aa11.37□□□□□ -0.59
SMARCE1-213ENST00000578044 RNF5Q99942 180 aa11.37□□□□□ -0.59
SMARCE1-213ENST00000578044 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
SMARCE1-213ENST00000578044 PIPOXQ9P0Z9 390 aa11.37□□□□□ -0.59
SMARCE1-213ENST00000578044 IGHV3-43A0A0B4J1X8 118 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 IGHV3-72A0A0B4J1Y9 119 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 LINC01548A6NM66 108 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 NUDT19A8MXV4 375 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 NDUFA3O95167 84 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 MPIG6BO95866 241 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 IGHV3-43DP0DP04 118 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 VSIG8P0DPA2 414 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 VDAC1P21796 283 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 PPIFP30405 207 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 TPBGQ13641 420 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 IRF3Q14653 427 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 OR6M1Q8NGM8 313 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 RAX2Q96IS3 184 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 UBE2E2Q96LR5 201 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 B9D2Q9BPU9 175 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 NABP2Q9BQ15 211 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 DUSP21Q9H596 190 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 SCN3BQ9NY72 215 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 ABRACLQ9P1F3 81 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 HSF4Q9ULV5 492 aa11.36□□□□□ -0.59
SMARCE1-213ENST00000578044 ZNF736B4DX44 427 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 RAB29O14966 203 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 IGLV1-40P01703 118 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 HTR2CP28335 458 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 INSL3P51460 131 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 F2RL1P55085 397 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 GABPB1Q06547 395 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 HSD17B12Q53GQ0 312 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 VAX1Q5SQQ9 334 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 TCTEX1D1Q8N7M0 179 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 OR2AK2Q8NG84 335 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 OR5M8Q8NGP6 311 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 STEAP1Q9UHE8 339 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 ZNF107Q9UII5 783 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 STAB2Q8WWQ8 2551 aa11.35□□□□□ -0.59
SMARCE1-213ENST00000578044 PNMA8CA0A1B0GUJ8 204 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 WI2-2373I1.2A0A1W2PRP0 233 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 UBE2QL1A1L167 161 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 OR5H14A6NHG9 310 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 RBBP9O75884 186 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 ARL6IP5O75915 188 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 DIRAS3O95661 229 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 RPLP1P05386 114 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 MC5RP33032 325 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 PSMD7P51665 324 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 DGCR2P98153 550 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 MMDQ15546 238 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 C5orf64Q2M2E5 130 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 FAM53AQ6NSI3 398 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 PRR18Q8N4B5 295 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 SVOPQ8N4V2 548 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 OR10V1Q8NGI7 309 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 UBALD1Q8TB05 177 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 PTX4Q96A99 478 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 KCTD7Q96MP8 289 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 HSPB9Q9BQS6 159 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 SULT4A1Q9BR01 284 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 URM1Q9BTM9 101 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 LINC00527Q9UJ94 153 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 TPRKBQ9Y3C4 175 aa11.34□□□□□ -0.59
SMARCE1-213ENST00000578044 SLC17A2O00624 439 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 NBR2O15453 112 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 PPP1CCP36873 323 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 ACTBP60709 375 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 UNC119Q13432 240 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 C9orf66Q5T8R8 295 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 ZNF660Q6AZW8 331 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 CEACAM19Q7Z692 300 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 MINDY2Q8NBR6 621 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 EDARADDQ8WWZ3 215 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 UFD1Q92890 307 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 ZNF251Q9BRH9 671 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 AGMATQ9BSE5 352 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 IFI27L2Q9H2X8 130 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 OR51J1Q9H342 316 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 SLC23A1Q9UHI7 598 aa11.33□□□□□ -0.6
SMARCE1-213ENST00000578044 SAA2-SAA4A0A096LPE2 208 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 FOXI3A8MTJ6 420 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 ARPC1BO15143 372 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 SAA2P0DJI9 122 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 BLVRBP30043 206 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 MLLT11Q13015 90 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 KIAA0141Q14154 515 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 GNMTQ14749 295 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 C19orf54Q5BKX5 351 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 RBM48Q5RL73 367 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 C6orf201Q7Z4U5 140 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 OR52L2PQ8NGH6 319 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 OR5AN1Q8NGI8 311 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms