RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZBTB34Q8NCN2 500 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIF1ANQ9NWT6 349 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 NKX6-3A6NJ46 265 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 HINT1P49773 126 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 IZUMO4Q1ZYL8 232 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 ASPHD2Q6ICH7 369 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 FAM122AQ96E09 287 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 TIMP4Q99727 224 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 LOC285556D6RIA3 1793 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 AHCTF1Q8WYP5 2266 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 LOC102724200A0A096LPH7 203 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 LOC390937A0A1W2PQ73 354 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 FGF12P61328 243 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 ZNF658BQ4V348 819 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 C19orf35Q6ZS72 473 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 SCARF2Q96GP6 870 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 FBLN5Q9UBX5 448 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 SVILO95425 2214 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 DEFA4P12838 97 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 SNAI3Q3KNW1 292 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 ABHD14AQ9BUJ0 271 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 GPR35Q9HC97 309 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 KLF13Q9Y2Y9 288 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 WASHC3Q9Y3C0 194 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 WIPI2Q9Y4P8 454 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 J3QT63 122 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 SLC25A5P05141 298 aaKnown RBP11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 CD1BP29016 333 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 NHLH1Q02575 133 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 WDFY1Q8IWB7 410 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 CLDND2Q8NHS1 167 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 TXNDC17Q9BRA2 123 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 PSMG3Q9BT73 122 aaPredicted RBP11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 TEX50A0A1B0GTY4 177 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 GRIFINA4D1Z8 144 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 APCSP02743 223 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 MT-ND6P03923 174 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 IL3RAP26951 378 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 UBE2L3P68036 154 aaKnown RBP11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 TRAT1Q6PIZ9 186 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 ZNF818PQ6ZRF7 136 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 ZNF488Q96MN9 340 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 SDF2L1Q9HCN8 221 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 ZNF891A8MT65 544 aaPredicted RBP11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 TGFBR3LH3BV60 316 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 K7ERU9 68 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 PSG4Q00888 419 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 GAB4Q2WGN9 574 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 HLA-BQ31612 363 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 GUSBP11Q6P575 273 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 C1QL4Q86Z23 238 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR4X1Q8NH49 305 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR5R1Q8NH85 324 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 HES4Q9HCC6 221 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 BMPR1BO00238 502 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 CCL3P10147 92 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 SLC35B1P78383 322 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 RNF24Q9Y225 148 aa11.33□□□□□ -0.6
PCDHGB3-201ENST00000576222 CDIPTO14735 213 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 SOD3P08294 240 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 CSN1S1P47710 185 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 SRSF4Q08170 494 aaKnown RBP11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 SPRED2Q7Z698 418 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 DYNLRB1Q9NP97 96 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 SLC22A20A6NK97 555 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 K7N7A8 449 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 HTR1DP28221 377 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 ICAM4Q14773 271 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 JOSD1Q15040 202 aaPredicted RBP11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 LINC00596Q86U02 117 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 CPEB3Q8NE35 698 aaKnown RBP11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 IGHV1OR15-9A0A0B4J2B8 117 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 OOEPA6NGQ2 149 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A8PA6NJQ4 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A7PA6NKC0 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A22PA8MWA6 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 IGHV3-13P01766 116 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 IGHV3-7P01780 117 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 IGKV3-11P04433 115 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 GPX4P36969 197 aaPredicted RBP11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 NXPH1P58417 271 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 CTAG1AP78358 180 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms