RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
VPS33B-208ENST00000574755 SLC25A31Q9H0C2 315 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 IGKV1D-17A0A075B6S4 117 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 IGHV3OR15-7A0A075B7D8 119 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 RNF212BA8MTL3 300 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 NUDT19A8MXV4 375 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 SIGLEC5O15389 551 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 CHST1O43916 411 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 CFHR2P36980 270 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 IZUMO4Q1ZYL8 232 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 SWI5Q1ZZU3 235 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 TMEM252Q8N6L7 170 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 ITLN1Q8WWA0 313 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
VPS33B-208ENST00000574755 LURAP1Q96LR2 239 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 MS4A7Q9GZW8 240 aaPredicted RBP11.76□□□□□ -0.53
VPS33B-208ENST00000574755 ARV1Q9H2C2 271 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
VPS33B-208ENST00000574755 B8ZZF3 427 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 C16orf97H3BN30 126 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 ZNF737O75373 536 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 SLC25A6P12236 298 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 PPP1CCP36873 323 aaKnown RBP11.75□□□□□ -0.53
VPS33B-208ENST00000574755 BLOC1S1P78537 153 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 CLINT1Q14677 625 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 IL34Q6ZMJ4 242 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 FAM90A1Q86YD7 464 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 HSD17B11Q8NBQ5 300 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 RFESDQ8TAC1 157 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 LSM10Q969L4 123 aaKnown RBP11.75□□□□□ -0.53
VPS33B-208ENST00000574755 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 PITX3O75364 302 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 TMEM50AO95807 157 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 SEC11BP0C7V7 166 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 MMP9P14780 707 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 PJVKQ0ZLH3 352 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 ZNF266Q14584 549 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 PRR30Q53SZ7 412 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-208ENST00000574755 FAM209AQ5JX71 171 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 TMEM108Q6UXF1 575 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 Q6ZRG5 221 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 ZNF808Q8N4W9 903 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-208ENST00000574755 ELOVL5Q9NYP7 299 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
VPS33B-208ENST00000574755 PLCE1Q9P212 2302 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 IGHV3-43A0A0B4J1X8 118 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 SPINT2O43291 252 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 FAM87AP0C7U9 286 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 IGHV3-43DP0DP04 118 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 SPP1P10451 314 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 DEFA5Q01523 94 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 PAX5Q02548 391 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 C1QTNF12Q5T7M4 302 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 TRAT1Q6PIZ9 186 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 Q6ZRM9 215 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 ZBTB34Q8NCN2 500 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 PPP1R35Q8TAP8 253 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 DCTN5Q9BTE1 182 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 SH3BGRL3Q9H299 93 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 ABCD4O14678 606 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 CST7O76096 145 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 IGKV1-5P01602 117 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 SRSF3P84103 164 aaKnown RBP11.74□□□□□ -0.53
VPS33B-208ENST00000574755 WFDC8Q8IUA0 241 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 ZNRF1Q8ND25 227 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 TOLLIPQ9H0E2 274 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 MSRB2Q9Y3D2 182 aa11.74□□□□□ -0.53
VPS33B-208ENST00000574755 DIDO1Q9BTC0 2240 aaKnown RBP11.73□□□□□ -0.53
VPS33B-208ENST00000574755 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 MGST3O14880 152 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 ARHGDIBP52566 201 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 F2RL1P55085 397 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 TNFAIP6P98066 277 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-208ENST00000574755 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 LTC4SQ16873 150 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 OR2B11Q5JQS5 317 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 SNX22Q96L94 193 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 TMEM231Q9H6L2 316 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 ZNF835Q9Y2P0 537 aa11.73□□□□□ -0.53
VPS33B-208ENST00000574755 ODAMA1E959 279 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 DEFB108AA8MXU0 73 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 LHBP01229 141 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 IGHV1-46P01743 117 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 ID4P47928 161 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 BAXQ07812 192 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 CATR1Q13166 79 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 LRRC46Q96FV0 321 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 KIAA1324LA8MWY0 1029 aaPredicted RBP11.72□□□□□ -0.53
VPS33B-208ENST00000574755 H3BP45 60 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 C15orf65H3BRN8 121 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 GFRA3O60609 400 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms