RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 DDIT4Q9NX09 232 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 IGLV1-36A0A0B4J1U3 117 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 LOC100130705A0A1B0GUX0 176 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 MCRIP1C9JLW8 97 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 M0R036 132 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 CDIPTO14735 213 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 MRASO14807 208 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 SNAI1O95863 264 aaPredicted RBP3.84□□□□□ -1.79
UBR1-208ENST00000569066 OXTP01178 125 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 HLA-DQB1P01920 261 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 FABP3P05413 133 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 OR4A8P0C604 315 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 SULT1A3P0DMM9 295 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 SULT1A4P0DMN0 295 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 CSNK2A2P19784 350 aaPredicted RBP3.84□□□□□ -1.79
UBR1-208ENST00000569066 SLC35A2P78381 396 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 PLPPR5Q32ZL2 321 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 SMARCD3Q6STE5 483 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 FAM131AQ6UXB0 335 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 OR6N1Q8NGY5 312 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 DYNLL2Q96FJ2 89 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 GALNT14Q96FL9 552 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 OR51E2Q9H255 320 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 C1orf198Q9H425 327 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 DUSP21Q9H596 190 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 UBE2ZQ9H832 354 aaPredicted RBP3.84□□□□□ -1.79
UBR1-208ENST00000569066 ZNF331Q9NQX6 463 aaPredicted RBP3.84□□□□□ -1.79
UBR1-208ENST00000569066 CELA1Q9UNI1 258 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 MTCL1Q9Y4B5 1905 aaKnown RBP3.84□□□□□ -1.8
UBR1-208ENST00000569066 MYO18AQ92614 2054 aaKnown RBP3.84□□□□□ -1.8
UBR1-208ENST00000569066 ITSN1Q15811 1721 aa3.84□□□□□ -1.8
UBR1-208ENST00000569066 PRRC2AP48634 2157 aaKnown RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 SMKR1H3BMG3 65 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 K7ERU9 68 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 PDYNP01213 254 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 OR8U9P0C7N5 309 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 NFYAP23511 347 aaPredicted RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 OMGP23515 440 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 ST3GAL4Q11206 333 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 OR7A5Q15622 319 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 TSNQ15631 228 aaKnown RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 BATFQ16520 125 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 HIST2H3PS2Q5TEC6 136 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 TMEM244Q5VVB8 128 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 ZNF493Q6ZR52 646 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 Q6ZVH6 145 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 H1FOOQ8IZA3 346 aaPredicted RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 OR4P4Q8NGL7 312 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 TMEM239Q8WW34 195 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 C1orf54Q8WWF1 131 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 SLC35E1Q96K37 410 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BLQ99880 126 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 AIF1LQ9BQI0 150 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 SEC11CQ9BY50 192 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 IL22Q9GZX6 179 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 ENPP4Q9Y6X5 453 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 SYCP2Q9BX26 1530 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 CHD3Q12873 2000 aaKnown RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 TRIP11Q15643 1979 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 SIPA1L1O43166 1804 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 FAM183AA6NL82 134 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 NCBP2LA6PVI3 153 aaKnown RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 ZNF705GA8MUZ8 300 aaPredicted RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 GPR75O95800 540 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 HPRT1P00492 218 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 BGLAPP02818 100 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 SERPINE1P05121 402 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 MMP7P09237 267 aaPredicted RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 OR5H8P0DN80 308 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 AKR1C4P17516 323 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 CDC42P60953 191 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 BTN3A2P78410 334 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 TMEM183BQ1AE95 376 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 TTLL9Q3SXZ7 439 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 C5orf47Q569G3 176 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 HENMT1Q5T8I9 393 aaKnown RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 ZNF705AQ6ZN79 300 aaPredicted RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 TMPPEQ6ZT21 453 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 OAFQ86UD1 273 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 TMEM183AQ8IXX5 376 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 OR5AK3PQ8NH89 298 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 MICU1Q9BPX6 476 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 RCL1Q9Y2P8 373 aaKnown RBP3.83□□□□□ -1.8
UBR1-208ENST00000569066 KPTNQ9Y664 436 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 V9GYS6 101 aa3.83□□□□□ -1.8
UBR1-208ENST00000569066 IGSF9BQ9UPX0 1349 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 TRAV39A0A0B4J263 110 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 DHRS12A0PJE2 317 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 TVP23AA6NH52 213 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 FAM166BA8MTA8 275 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR11H12B2RN74 326 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BKO60814 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 SS18L1O75177 396 aaPredicted RBP3.82□□□□□ -1.8
UBR1-208ENST00000569066 GLSO94925 669 aaPredicted RBP3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BJP06899 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 CST2P09228 141 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 UCHL1P09936 223 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 PGA3P0DJD8 388 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 CD79AP11912 226 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms