RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 DAOP14920 347 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 CCNOP22674 350 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 P2RY1P47900 373 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 TMEM33P57088 247 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 PIGCQ92535 297 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 GTF3AQ92664 365 aaKnown RBP9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 MSI2Q96DH6 328 aaKnown RBP9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 ABHD14BQ96IU4 210 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 OR51B6Q9H340 312 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 OR2S2Q9NQN1 319 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 SLC2A9Q9NRM0 540 aa9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 FAM212BQ9NTI7 297 aaPredicted RBP9.73□□□□□ -0.85
SNAPC5-208ENST00000568875 BORCS7-ASMTA0A0B4J1R7 106 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 PQLC2LA1A4F0 135 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 FAM74A7A6NL05 159 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 GPR137BO60478 399 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 TSPAN9O75954 239 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 CD5P06127 495 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 CTXN2P0C2S0 81 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 ADCYAP1P18509 176 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 RAB5CP51148 216 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 HERV-K104P61576 105 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 RND3P61587 244 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 HMGN3Q15651 99 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 MPV17LQ2QL34 196 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 TMEM249Q2WGJ8 235 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 KRTAP21-3Q3LHN1 58 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 PIGYQ3MUY2 71 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 FAM74A3Q4VXF1 159 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 OR1J1Q8NGS3 322 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 MARS2Q96GW9 593 aaKnown RBP9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 NRIP2Q9BQI9 281 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 TREM1Q9NP99 234 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 TAAR3PQ9P1P4 343 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 RCC2Q9P258 522 aaKnown RBP9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 FBXL17Q9UF56 701 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 PRELID1Q9Y255 219 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 MALRD1Q5VYJ5 2156 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 CUBNO60494 3623 aa9.72□□□□□ -0.85
SNAPC5-208ENST00000568875 DUXBA0A1W2PPF3 345 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 INAFM1C9JVW0 142 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 NUPL2O15504 423 aaKnown RBP9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 CD5LO43866 347 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 FBXO24O75426 580 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 MED6O75586 246 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 CDS2O95674 445 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 NGFP01138 241 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 IGHV3-13P01766 116 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 MBPP02686 304 aaPredicted RBP9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 OR5AC1P0C628 307 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 KLF3P57682 345 aaPredicted RBP9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 SELENOVP59797 346 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 FGF12P61328 243 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 LINC00596Q86U02 117 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 C1orf174Q8IYL3 243 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 GLYATL2Q8WU03 294 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 TOMM40LQ969M1 308 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 APOBEC3DQ96AK3 386 aaPredicted RBP9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 PIMREGQ9BSJ6 248 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 TLNRD1Q9H1K6 362 aa9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 RIMS4Q9H426 269 aaPredicted RBP9.71□□□□□ -0.85
SNAPC5-208ENST00000568875 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.71□□□□□ -0.862e-13■■■■□ 22.7
SNAPC5-208ENST00000568875 RNASEK-C17orf49H0YIS7 233 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 H7C2Y5 167 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 GPR31O00270 319 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 ST8SIA3O43173 380 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 LPAR6P43657 344 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 DVL1P1P54792 670 aaPredicted RBP9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 GUCA2BQ16661 112 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 CEACAM21Q3KPI0 293 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 ZNF718Q3SXZ3 478 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 LDLRAD3Q86YD5 345 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 MKXQ8IYA7 352 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 TMEM56Q96MV1 263 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 SPIN2AQ99865 258 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 SPIN2BQ9BPZ2 258 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 GINS3Q9BRX5 216 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 BPESC1Q9GZL8 116 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 HRH4Q9H3N8 390 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 LSM5Q9Y4Y9 91 aaKnown RBP9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 TMEM56-RWDD3S4R434 201 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 IGHV4-61A0A0C4DH41 118 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 C17orf100A8MU93 164 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 LYNX1G3V0Z9 82 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 MPPED1O15442 326 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 DIRAS3O95661 229 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 NAPSAO96009 420 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 PLATP00750 562 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 PPYP01298 95 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 LYNX1P0DP58 116 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 COL8A2P25067 703 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 KCNJ3P48549 501 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 ALKBH6Q3KRA9 238 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 MBNL2Q5VZF2 373 aaKnown RBP9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 HAGHLQ6PII5 290 aaPredicted RBP9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 SLC25A26Q70HW3 274 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 CALHM1Q8IU99 346 aa9.7□□□□□ -0.86
SNAPC5-208ENST00000568875 BOLLQ8N9W6 283 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms