RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 ZNF273Q14593 569 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 MEF2DQ14814 521 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 ATXN7L3Q14CW9 347 aaPredicted RBP9.03□□□□□ -0.96
LINC01228-201ENST00000567966 RBMS2Q15434 407 aaKnown RBP9.03□□□□□ -0.96
LINC01228-201ENST00000567966 PNLIPRP3Q17RR3 467 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 ZNF260Q3ZCT1 412 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 CDNFQ49AH0 187 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 MIDNQ504T8 468 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 C6orf183Q5T699 404 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 STEAP1BQ6NZ63 245 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 VMO1Q7Z5L0 202 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 TRAPPC6BQ86SZ2 158 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 OR52M1Q8NGK5 317 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 OR13D1Q8NGV5 346 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 PLPPR1Q8TBJ4 325 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 JMJD8Q96S16 334 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 FAAP24Q9BTP7 215 aa9.03□□□□□ -0.96
LINC01228-201ENST00000567966 RANGRFQ9HD47 186 aaPredicted RBP9.03□□□□□ -0.96
LINC01228-201ENST00000567966 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC01228-201ENST00000567966 MBNL3Q9NUK0 354 aaKnown RBP9.03□□□□□ -0.96
LINC01228-201ENST00000567966 A0A087X0M5 115 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 A0A0A6YYD4 124 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 IGHV1-69DA0A0B4J2H0 117 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 A0A1B0GX30 115 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 SNRPGP15A8MWD9 76 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 DISC1C4P0D8 188 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 HSPB6O14558 160 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 SNAPC5O75971 98 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 RAB3DO95716 219 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 NAPSAO96009 420 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 IGHV1-69P01742 117 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 C1QBP02746 253 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 IGHV1-8P0DP01 117 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 PTHLHP12272 177 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 TBPP20226 339 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 CBX5P45973 191 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 MRPS15P82914 257 aaKnown RBP9.02□□□□□ -0.97
LINC01228-201ENST00000567966 SRSF7Q16629 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC01228-201ENST00000567966 Q3ZCU0 254 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 AWAT1Q58HT5 328 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 NKAPLQ5M9Q1 402 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 MOB1BQ7L9L4 216 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 TCF23Q7RTU1 214 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 C6orf201Q7Z4U5 140 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 RTN4RL2Q86UN3 420 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 NOXA1Q86UR1 476 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 TPRX1Q8N7U7 411 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 C3orf56Q8N813 242 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 OR11H6Q8NGC7 330 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 OR4C16Q8NGL9 310 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 GIMAP1Q8WWP7 306 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 TAF15Q92804 592 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC01228-201ENST00000567966 ZNF486Q96H40 463 aaPredicted RBP9.02□□□□□ -0.97
LINC01228-201ENST00000567966 SLC25A21Q9BQT8 299 aaPredicted RBP9.02□□□□□ -0.97
LINC01228-201ENST00000567966 SULT4A1Q9BR01 284 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 NICN1Q9BSH3 213 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 PECRQ9BY49 303 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 KCNK15Q9H427 330 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 KCNIP1Q9NZI2 227 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 ZNF581Q9P0T4 197 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 SCP2D1Q9UJQ7 156 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 TRAPPC2LQ9UL33 140 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 SESN1Q9Y6P5 492 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 TENM1Q9UKZ4 2725 aa9.02□□□□□ -0.97
LINC01228-201ENST00000567966 UBE2QL1A1L167 161 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 DNAJC9-AS1A6NH13 148 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 ZNF736B4DX44 427 aaPredicted RBP9.01□□□□□ -0.97
LINC01228-201ENST00000567966 ARPC1BO15143 372 aaKnown RBP9.01□□□□□ -0.97
LINC01228-201ENST00000567966 SPINT2O43291 252 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 SSNA1O43805 119 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 CD74P04233 296 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 IGHV4-38-2P0DP08 117 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 HIST1H1DP16402 221 aaKnown RBP9.01□□□□□ -0.97
LINC01228-201ENST00000567966 CCL3L1P16619 93 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 CD34P28906 385 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 GNG2P59768 71 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 C17orf58Q2M2W7 97 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 PLAC9Q5JTB6 97 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 ZNF880Q6PDB4 577 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 GLDNQ6ZMI3 551 aaPredicted RBP9.01□□□□□ -0.97
LINC01228-201ENST00000567966 C8orf31Q8N9H6 132 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 OR13A1Q8NGR1 328 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 CCDC107Q8WV48 283 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 LHX4Q969G2 390 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 ARHGAP5-AS1Q96IT6 56 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 MS4A7Q9GZW8 240 aaPredicted RBP9.01□□□□□ -0.97
LINC01228-201ENST00000567966 ALX4Q9H161 411 aaPredicted RBP9.01□□□□□ -0.97
LINC01228-201ENST00000567966 TMEM133Q9H2Q1 129 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 PRDM13Q9H4Q3 707 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 RANBP3Q9H6Z4 567 aaPredicted RBP9.01□□□□□ -0.97
LINC01228-201ENST00000567966 C12orf4Q9NQ89 552 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 IFT46Q9NQC8 304 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 CALYQ9NYX4 217 aa9.01□□□□□ -0.97
LINC01228-201ENST00000567966 MDFIC2A0A1B0GVS7 189 aa9□□□□□ -0.97
LINC01228-201ENST00000567966 FAM172BPA6NC97 362 aa9□□□□□ -0.97
LINC01228-201ENST00000567966 TMEM235A6NFC5 223 aa9□□□□□ -0.97
LINC01228-201ENST00000567966 RNASEK-C17orf49H0YIS7 233 aa9□□□□□ -0.97
LINC01228-201ENST00000567966 C15orf65H3BRN8 121 aa9□□□□□ -0.97
LINC01228-201ENST00000567966 F2RL2O00254 374 aa9□□□□□ -0.97
LINC01228-201ENST00000567966 CREBL2O60519 120 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms