RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 FAM185AQ8N0U4 392 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 OR52M1Q8NGK5 317 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 H1FXQ92522 213 aaKnown RBP15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 TOMM40LQ969M1 308 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 OR2S2Q9NQN1 319 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 RDH8Q9NYR8 311 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 DOCK11Q5JSL3 2073 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 VPS13CQ709C8 3753 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 YPEL1O60688 119 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 PFDN1O60925 122 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 ATP5J2P56134 94 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 CBX3Q13185 183 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 ABCA11PQ4W5N1 156 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 TCF23Q7RTU1 214 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 FGFRL1Q8N441 504 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 CCDC71LQ8N9Z2 235 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 OR10V1Q8NGI7 309 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 ZNF431Q8TF32 576 aaPredicted RBP15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 EDARADDQ8WWZ3 215 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 YPEL2Q96QA6 119 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 SLC5A7Q9GZV3 580 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 MED28Q9H204 178 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 C19orf12Q9NSK7 152 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 IDI2-AS1Q9NZ38 188 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 ZNF221Q9UK13 617 aa15.74■□□□□ 0.11
CSPG4P13-201ENST00000565545 TLN2Q9Y4G6 2542 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 A0A1W2PPH5 198 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 ITGB1BP1O14713 200 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 AKR1C4P17516 323 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 DSCR9P59020 149 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 RRAS2P62070 204 aaPredicted RBP15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 BAMBIQ13145 260 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 MSMO1Q15800 293 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 CD276Q5ZPR3 534 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 WDR25Q64LD2 544 aaPredicted RBP15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 TMEM200BQ69YZ2 307 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 LYG2Q86SG7 212 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 ZNF525Q8N782 197 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 ADAD2Q8NCV1 583 aaKnown RBP15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 OR52L2PQ8NGH6 319 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 SPATA3Q8NHX4 192 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 RFESDQ8TAC1 157 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 C8orf46Q8TAG6 207 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 UBALD1Q8TB05 177 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 CAPSLQ8WWF8 208 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 RAB39BQ96DA2 213 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 AKR1E2Q96JD6 320 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 ZNF714Q96N38 554 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 SEC22CQ9BRL7 303 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 GSX2Q9BZM3 304 aa15.73■□□□□ 0.11
CSPG4P13-201ENST00000565545 GPR31O00270 319 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 SLC22A5O76082 557 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 S100GP29377 79 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 LOXL3P58215 753 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 RND3P61587 244 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 DHRS2Q13268 280 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 SGPP2Q8IWX5 399 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 SECTM1Q8WVN6 248 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 TMEM230Q96A57 120 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 DMRTB1Q96MA1 342 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 PIMREGQ9BSJ6 248 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 GNG12Q9UBI6 72 aa15.72■□□□□ 0.11
CSPG4P13-201ENST00000565545 IGKV1D-13A0A0B4J2D9 117 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 C9orf170A2RU37 121 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 SSNA1O43805 119 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 HLA-AP01891 365 aaKnown RBP15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 IGKV1-13P0DP09 117 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 GNRHRP30968 328 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 PIGPP57054 158 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 GNB2P62879 340 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 PPP1R1AQ13522 171 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 ZNF273Q14593 569 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 Q3ZCU0 254 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 MORN2Q502X0 79 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 HEPN1Q6WQI6 88 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 CMTM1Q8IZ96 169 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 ZBTB34Q8NCN2 500 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 FAM168AQ92567 244 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 SLC2A9Q9NRM0 540 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 GFOD1Q9NXC2 390 aa15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 RBM7Q9Y580 266 aaKnown RBP15.71■□□□□ 0.11
CSPG4P13-201ENST00000565545 CRYM-AS1A6NIL9 109 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 SFT2D2O95562 160 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 PI3P19957 117 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 PPP1CCP36873 323 aaKnown RBP15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 ESCO2Q56NI9 601 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 CLEC2AQ6UVW9 174 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 BVESQ8NE79 360 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 C10orf105Q8TEF2 133 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 PPP1R14BQ96C90 147 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 SSBP3Q9BWW4 388 aaPredicted RBP15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 RPUSD1Q9UJJ7 312 aaKnown RBP15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 KCNIP3Q9Y2W7 256 aa15.7■□□□□ 0.1
CSPG4P13-201ENST00000565545 A0A0B4J2A0 478 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 TEX13DA0A0J9YY54 714 aaPredicted RBP15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 MEX3AA1L020 520 aaKnown RBP15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 DUS4LO95620 317 aaKnown RBP15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 RBP4P02753 201 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 ANXA3P12429 323 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 RAB7AP51149 207 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms